Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB28P51157 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB28P51157 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB28P51157 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB28P51157 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB28P51157 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB28P51157 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RAB28P51157 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB28P51157 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 AC006116.8-202ENST00000587620 1550 ntBASIC17.15■□□□□ 0.34
RAB28P51157 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB28P51157 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB28P51157 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 AL732292.2-201ENST00000609649 430 ntBASIC17.15■□□□□ 0.34
RAB28P51157 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB28P51157 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB28P51157 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB28P51157 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB28P51157 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB28P51157 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB28P51157 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB28P51157 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB28P51157 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RAB28P51157 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB28P51157 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB28P51157 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB28P51157 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB28P51157 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB28P51157 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 AL450487.1-201ENST00000426799 995 ntBASIC17.14■□□□□ 0.33
RAB28P51157 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.14■□□□□ 0.33
RAB28P51157 KRT126P-201ENST00000549467 1181 ntBASIC17.14■□□□□ 0.33
RAB28P51157 AC111152.3-201ENST00000569699 673 ntBASIC17.14■□□□□ 0.33
RAB28P51157 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB28P51157 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB28P51157 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB28P51157 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB28P51157 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAB28P51157 AC012317.2-201ENST00000623305 2251 ntBASIC17.13■□□□□ 0.33
RAB28P51157 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB28P51157 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB28P51157 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB28P51157 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB28P51157 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB28P51157 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 AC103564.2-201ENST00000432853 1299 ntBASIC17.13■□□□□ 0.33
RAB28P51157 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB28P51157 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB28P51157 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.13■□□□□ 0.33
RAB28P51157 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms