Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.1■□□□□ 0.17
GDF1P27539 RBM17P3-201ENST00000417687 1192 ntBASIC16.1■□□□□ 0.17
GDF1P27539 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 ABCD1P5-201ENST00000445663 754 ntBASIC16.1■□□□□ 0.17
GDF1P27539 AC009078.2-202ENST00000463353 338 ntBASIC16.1■□□□□ 0.17
GDF1P27539 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.1■□□□□ 0.17
GDF1P27539 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 AC104692.2-201ENST00000603054 253 ntBASIC16.1■□□□□ 0.17
GDF1P27539 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.1■□□□□ 0.17
GDF1P27539 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.1■□□□□ 0.17
GDF1P27539 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GDF1P27539 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDF1P27539 AL020996.1-203ENST00000536896 2307 ntBASIC16.1■□□□□ 0.17
GDF1P27539 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GDF1P27539 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GDF1P27539 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.09■□□□□ 0.17
GDF1P27539 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.09■□□□□ 0.17
GDF1P27539 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
GDF1P27539 AL355877.3-201ENST00000622820 899 ntBASIC16.09■□□□□ 0.17
GDF1P27539 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GDF1P27539 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 FLJ13224-201ENST00000313737 1514 ntBASIC16.09■□□□□ 0.17
GDF1P27539 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDF1P27539 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDF1P27539 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.09■□□□□ 0.17
GDF1P27539 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
GDF1P27539 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
GDF1P27539 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GDF1P27539 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GDF1P27539 ABALON-201ENST00000629058 1903 ntBASIC16.08■□□□□ 0.16
GDF1P27539 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
GDF1P27539 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.08■□□□□ 0.16
GDF1P27539 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.08■□□□□ 0.16
GDF1P27539 FDX1P1-201ENST00000449115 551 ntBASIC16.08■□□□□ 0.16
GDF1P27539 FAM197Y8-203ENST00000450145 560 ntBASIC16.08■□□□□ 0.16
GDF1P27539 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
GDF1P27539 AC106795.1-205ENST00000512851 1056 ntBASIC16.08■□□□□ 0.16
GDF1P27539 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.08■□□□□ 0.16
GDF1P27539 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.08■□□□□ 0.16
GDF1P27539 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.08■□□□□ 0.16
GDF1P27539 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 AC064862.7-201ENST00000604520 867 ntBASIC16.08■□□□□ 0.16
GDF1P27539 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 TP73-AS1-207ENST00000624167 988 ntBASIC16.08■□□□□ 0.16
GDF1P27539 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDF1P27539 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GDF1P27539 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms