Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.5■□□□□ 0.39
VARSP26640 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VARSP26640 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARSP26640 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VARSP26640 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
VARSP26640 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VARSP26640 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.49■□□□□ 0.39
VARSP26640 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.49■□□□□ 0.39
VARSP26640 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
VARSP26640 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
VARSP26640 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.49■□□□□ 0.39
VARSP26640 AL121894.2-201ENST00000602977 491 ntBASIC17.49■□□□□ 0.39
VARSP26640 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.49■□□□□ 0.39
VARSP26640 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VARSP26640 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
VARSP26640 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VARSP26640 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VARSP26640 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 AC132938.6-201ENST00000623828 1655 ntBASIC17.48■□□□□ 0.39
VARSP26640 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.48■□□□□ 0.39
VARSP26640 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.48■□□□□ 0.39
VARSP26640 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
VARSP26640 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.48■□□□□ 0.39
VARSP26640 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
VARSP26640 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VARSP26640 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.48■□□□□ 0.39
VARSP26640 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.48■□□□□ 0.39
VARSP26640 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.48■□□□□ 0.39
VARSP26640 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.48■□□□□ 0.39
VARSP26640 AC112907.2-201ENST00000448639 330 ntBASIC17.48■□□□□ 0.39
VARSP26640 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.48■□□□□ 0.39
VARSP26640 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.48■□□□□ 0.39
VARSP26640 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.48■□□□□ 0.39
VARSP26640 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.48■□□□□ 0.39
VARSP26640 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.48■□□□□ 0.39
VARSP26640 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.48■□□□□ 0.39
VARSP26640 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VARSP26640 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VARSP26640 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.47■□□□□ 0.39
VARSP26640 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.47■□□□□ 0.39
VARSP26640 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VARSP26640 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VARSP26640 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
VARSP26640 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.47■□□□□ 0.39
VARSP26640 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VARSP26640 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
VARSP26640 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 HLA-F-220ENST00000434407 884 ntBASIC17.47■□□□□ 0.39
VARSP26640 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 AC024563.2-201ENST00000603282 481 ntBASIC17.47■□□□□ 0.39
VARSP26640 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.47■□□□□ 0.39
VARSP26640 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VARSP26640 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VARSP26640 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms