Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RAB5AP20339 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RAB5AP20339 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RAB5AP20339 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB5AP20339 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB5AP20339 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RAB5AP20339 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 TFP1-202ENST00000475455 1573 ntBASIC13.81□□□□□ -0.2
RAB5AP20339 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB5AP20339 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.81□□□□□ -0.2
RAB5AP20339 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB5AP20339 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RAB5AP20339 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB5AP20339 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB5AP20339 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB5AP20339 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB5AP20339 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB5AP20339 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 AC104581.4-201ENST00000623126 3052 ntBASIC13.8□□□□□ -0.2
RAB5AP20339 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 RCC2P6-201ENST00000526625 1557 ntBASIC13.8□□□□□ -0.2
RAB5AP20339 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB5AP20339 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB5AP20339 AC068587.9-201ENST00000641814 219 ntBASIC13.8□□□□□ -0.2
RAB5AP20339 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB5AP20339 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms