Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.34■■□□□ 1.33
LTN1O94822 SPCS2P1-201ENST00000561636 679 ntBASIC23.34■■□□□ 1.33
LTN1O94822 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.34■■□□□ 1.33
LTN1O94822 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
LTN1O94822 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTN1O94822 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
LTN1O94822 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.33■■□□□ 1.33
LTN1O94822 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.33■■□□□ 1.33
LTN1O94822 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.33■■□□□ 1.33
LTN1O94822 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LTN1O94822 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.33■■□□□ 1.33
LTN1O94822 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LTN1O94822 MYCLP1-201ENST00000372451 1075 ntBASIC23.33■■□□□ 1.33
LTN1O94822 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
LTN1O94822 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.33
LTN1O94822 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.33■■□□□ 1.33
LTN1O94822 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
LTN1O94822 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.33■■□□□ 1.33
LTN1O94822 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LTN1O94822 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LTN1O94822 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LTN1O94822 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.33■■□□□ 1.32
LTN1O94822 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LTN1O94822 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.33■■□□□ 1.32
LTN1O94822 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.33■■□□□ 1.32
LTN1O94822 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.32■■□□□ 1.32
LTN1O94822 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
LTN1O94822 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.32■■□□□ 1.32
LTN1O94822 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.32■■□□□ 1.32
LTN1O94822 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.32■■□□□ 1.32
LTN1O94822 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC23.32■■□□□ 1.32
LTN1O94822 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.32■■□□□ 1.32
LTN1O94822 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC23.32■■□□□ 1.32
LTN1O94822 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.32■■□□□ 1.32
LTN1O94822 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
LTN1O94822 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.32■■□□□ 1.32
LTN1O94822 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.32■■□□□ 1.32
LTN1O94822 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.32■■□□□ 1.32
LTN1O94822 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC23.32■■□□□ 1.32
LTN1O94822 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
LTN1O94822 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LTN1O94822 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.32■■□□□ 1.32
LTN1O94822 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 KRT18P28-201ENST00000453838 1332 ntBASIC23.31■■□□□ 1.32
LTN1O94822 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.31■■□□□ 1.32
LTN1O94822 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.31■■□□□ 1.32
LTN1O94822 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC23.31■■□□□ 1.32
LTN1O94822 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 DDT-204ENST00000404092 805 ntTSL 3 BASIC23.31■■□□□ 1.32
LTN1O94822 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC23.31■■□□□ 1.32
LTN1O94822 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC23.31■■□□□ 1.32
LTN1O94822 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
LTN1O94822 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.31■■□□□ 1.32
LTN1O94822 SNHG9-202ENST00000564014 471 ntBASIC23.31■■□□□ 1.32
LTN1O94822 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.31■■□□□ 1.32
LTN1O94822 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC23.31■■□□□ 1.32
LTN1O94822 AP000974.1-201ENST00000623909 2387 ntBASIC23.31■■□□□ 1.32
LTN1O94822 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LTN1O94822 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.3■■□□□ 1.32
LTN1O94822 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.3■■□□□ 1.32
LTN1O94822 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC23.3■■□□□ 1.32
LTN1O94822 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LTN1O94822 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.3■■□□□ 1.32
LTN1O94822 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.3■■□□□ 1.32
LTN1O94822 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 AC092919.2-201ENST00000623631 1645 ntBASIC23.3■■□□□ 1.32
LTN1O94822 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LTN1O94822 TNXA-203ENST00000507684 2038 ntBASIC23.3■■□□□ 1.32
LTN1O94822 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.3■■□□□ 1.32
LTN1O94822 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LTN1O94822 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
LTN1O94822 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.29■■□□□ 1.32
LTN1O94822 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
LTN1O94822 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.29■■□□□ 1.32
LTN1O94822 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.29■■□□□ 1.32
LTN1O94822 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms