Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1BO75841 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 AC010980.2-201ENST00000587099 1412 ntBASIC15.48■□□□□ 0.07
UPK1BO75841 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UPK1BO75841 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1BO75841 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
UPK1BO75841 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UPK1BO75841 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
UPK1BO75841 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
UPK1BO75841 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.47■□□□□ 0.07
UPK1BO75841 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.47■□□□□ 0.07
UPK1BO75841 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
UPK1BO75841 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
UPK1BO75841 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
UPK1BO75841 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 DUTP2-201ENST00000519164 463 ntBASIC15.47■□□□□ 0.07
UPK1BO75841 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
UPK1BO75841 KRT8P50-201ENST00000562022 1438 ntBASIC15.47■□□□□ 0.07
UPK1BO75841 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
UPK1BO75841 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.47■□□□□ 0.07
UPK1BO75841 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.47■□□□□ 0.07
UPK1BO75841 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK1BO75841 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.47■□□□□ 0.07
UPK1BO75841 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1BO75841 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
UPK1BO75841 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
UPK1BO75841 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.46■□□□□ 0.07
UPK1BO75841 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
UPK1BO75841 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.46■□□□□ 0.07
UPK1BO75841 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 KRT8P11-201ENST00000409686 1436 ntBASIC15.46■□□□□ 0.07
UPK1BO75841 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
UPK1BO75841 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.46■□□□□ 0.07
UPK1BO75841 AC123595.1-201ENST00000440769 1046 ntBASIC15.46■□□□□ 0.07
UPK1BO75841 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
UPK1BO75841 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK1BO75841 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
UPK1BO75841 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.46■□□□□ 0.07
UPK1BO75841 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
UPK1BO75841 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
UPK1BO75841 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms