Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXN1O15353 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.17■□□□□ 0.98
FOXN1O15353 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXN1O15353 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
FOXN1O15353 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
FOXN1O15353 AL390961.4-201ENST00000623958 2535 ntBASIC21.16■□□□□ 0.98
FOXN1O15353 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXN1O15353 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 BICD1-207ENST00000551848 1962 ntBASIC21.16■□□□□ 0.98
FOXN1O15353 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.16■□□□□ 0.98
FOXN1O15353 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.16■□□□□ 0.98
FOXN1O15353 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.16■□□□□ 0.98
FOXN1O15353 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.16■□□□□ 0.98
FOXN1O15353 AL139288.1-201ENST00000623748 933 ntBASIC21.16■□□□□ 0.98
FOXN1O15353 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXN1O15353 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.16■□□□□ 0.98
FOXN1O15353 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXN1O15353 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXN1O15353 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXN1O15353 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXN1O15353 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXN1O15353 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXN1O15353 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FOXN1O15353 AJ011932.1-201ENST00000621707 465 ntBASIC21.15■□□□□ 0.98
FOXN1O15353 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
FOXN1O15353 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXN1O15353 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXN1O15353 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXN1O15353 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
FOXN1O15353 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
FOXN1O15353 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FOXN1O15353 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FOXN1O15353 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FOXN1O15353 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
FOXN1O15353 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXN1O15353 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
FOXN1O15353 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXN1O15353 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.14■□□□□ 0.97
FOXN1O15353 AC108751.1-201ENST00000490852 363 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.14■□□□□ 0.97
FOXN1O15353 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXN1O15353 AC087641.1-201ENST00000557561 1021 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
FOXN1O15353 MIR3180-4-201ENST00000582223 153 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 NKAPP1-205ENST00000585790 367 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.14■□□□□ 0.97
FOXN1O15353 AL359881.2-201ENST00000602973 570 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 AC068587.9-201ENST00000641814 219 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXN1O15353 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.14■□□□□ 0.97
FOXN1O15353 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXN1O15353 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.14■□□□□ 0.97
FOXN1O15353 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.14■□□□□ 0.97
FOXN1O15353 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXN1O15353 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXN1O15353 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXN1O15353 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FOXN1O15353 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXN1O15353 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXN1O15353 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXN1O15353 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXN1O15353 AC008556.1-201ENST00000610908 2040 ntBASIC21.13■□□□□ 0.97
FOXN1O15353 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXN1O15353 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.13■□□□□ 0.97
FOXN1O15353 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms