Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 OR7E14P-202ENST00000530490 1290 ntBASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 AF228730.7-201ENST00000641842 219 ntBASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
DENND2AQ9ULE3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 AC116407.3-201ENST00000623905 1129 ntBASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 SIRPAP1-201ENST00000448467 1770 ntBASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND2AQ9ULE3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 AL353593.2-201ENST00000602529 1483 ntBASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 DDX43P3-201ENST00000441064 443 ntBASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 SLC25A1P1-201ENST00000528351 927 ntBASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 AC073592.5-201ENST00000624854 528 ntBASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 AL022326.1-202ENST00000641533 845 ntBASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 AL049757.1-201ENST00000616842 1596 ntBASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DENND2AQ9ULE3 AP000997.3-201ENST00000623333 2250 ntBASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 SIGLEC16-201ENST00000599858 1437 ntBASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 BX005266.1-201ENST00000473402 457 ntBASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 AL671883.3-201ENST00000603274 991 ntBASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.46■■□□□ 1.03
DENND2AQ9ULE3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms