Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 MIR3960-201ENST00000583311 91 ntBASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 MIR6090-201ENST00000622481 60 ntBASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CDC42SE1Q9NRR8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 AC073347.1-201ENST00000421633 2643 ntBASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 MNT-208ENST00000575394 606 ntTSL 4 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 AL356585.2-201ENST00000625078 2396 ntBASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CDC42SE1Q9NRR8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms