Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 SPDYE13P-201ENST00000445314 798 ntBASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 LINC01451-201ENST00000623792 534 ntBASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC38A1Q9H2H9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 LINC01311-201ENST00000565162 1445 ntBASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 AC092647.4-201ENST00000457211 535 ntBASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 AC063952.2-201ENST00000498792 1227 ntBASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 AL390719.2-201ENST00000606993 987 ntBASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC38A1Q9H2H9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 AC068472.1-201ENST00000474589 881 ntBASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 RNF126P1-202ENST00000569893 925 ntBASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 AC005332.3-201ENST00000589904 676 ntBASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 AC083849.1-201ENST00000615227 514 ntBASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC38A1Q9H2H9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 AL023806.1-201ENST00000603994 1649 ntBASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 MTCL1P1-201ENST00000446207 792 ntBASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC38A1Q9H2H9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms