Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE1Q99829 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CPNE1Q99829 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.79■□□□□ 0.44
CPNE1Q99829 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.79■□□□□ 0.44
CPNE1Q99829 AC009154.2-201ENST00000621177 724 ntBASIC17.79■□□□□ 0.44
CPNE1Q99829 AC079602.3-201ENST00000623931 403 ntBASIC17.79■□□□□ 0.44
CPNE1Q99829 AL023973.1-201ENST00000624619 620 ntBASIC17.79■□□□□ 0.44
CPNE1Q99829 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CPNE1Q99829 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CPNE1Q99829 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE1Q99829 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPNE1Q99829 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPNE1Q99829 AC106820.2-201ENST00000563775 3264 ntBASIC17.78■□□□□ 0.44
CPNE1Q99829 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CPNE1Q99829 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE1Q99829 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.78■□□□□ 0.44
CPNE1Q99829 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.78■□□□□ 0.44
CPNE1Q99829 AC140113.3-201ENST00000605663 199 ntBASIC17.78■□□□□ 0.44
CPNE1Q99829 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPNE1Q99829 AL031432.5-201ENST00000641059 760 ntBASIC17.78■□□□□ 0.44
CPNE1Q99829 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CPNE1Q99829 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE1Q99829 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE1Q99829 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE1Q99829 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE1Q99829 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE1Q99829 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 AL121761.2-201ENST00000598007 1648 ntBASIC17.77■□□□□ 0.44
CPNE1Q99829 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CPNE1Q99829 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.77■□□□□ 0.44
CPNE1Q99829 KRT18P48-201ENST00000434763 852 ntBASIC17.77■□□□□ 0.44
CPNE1Q99829 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.77■□□□□ 0.44
CPNE1Q99829 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE1Q99829 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE1Q99829 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE1Q99829 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE1Q99829 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE1Q99829 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE1Q99829 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE1Q99829 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CPNE1Q99829 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CPNE1Q99829 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CPNE1Q99829 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.77■□□□□ 0.43
CPNE1Q99829 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CPNE1Q99829 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CPNE1Q99829 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE1Q99829 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE1Q99829 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CPNE1Q99829 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE1Q99829 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CPNE1Q99829 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE1Q99829 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CPNE1Q99829 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE1Q99829 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.77■□□□□ 0.43
CPNE1Q99829 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE1Q99829 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CPNE1Q99829 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CPNE1Q99829 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE1Q99829 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE1Q99829 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms