Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL21A1Q96P44 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
COL21A1Q96P44 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL21A1Q96P44 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 AC087388.1-201ENST00000571370 1112 ntBASIC16.83■□□□□ 0.28
COL21A1Q96P44 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL21A1Q96P44 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.83■□□□□ 0.28
COL21A1Q96P44 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 ZNF444P1-201ENST00000559497 298 ntBASIC16.82■□□□□ 0.28
COL21A1Q96P44 AC024563.2-201ENST00000603282 481 ntBASIC16.82■□□□□ 0.28
COL21A1Q96P44 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 AC083849.1-201ENST00000615227 514 ntBASIC16.82■□□□□ 0.28
COL21A1Q96P44 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 AC106820.2-201ENST00000563775 3264 ntBASIC16.82■□□□□ 0.28
COL21A1Q96P44 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
COL21A1Q96P44 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL21A1Q96P44 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL21A1Q96P44 AL031133.1-201ENST00000406807 723 ntBASIC16.81■□□□□ 0.28
COL21A1Q96P44 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 KRT18P35-201ENST00000510488 1269 ntBASIC16.81■□□□□ 0.28
COL21A1Q96P44 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.81■□□□□ 0.28
COL21A1Q96P44 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms