Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COX4I2Q96KJ9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COX4I2Q96KJ9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COX4I2Q96KJ9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.58■□□□□ 0.24
COX4I2Q96KJ9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COX4I2Q96KJ9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COX4I2Q96KJ9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 LINC00602-201ENST00000629776 2065 ntBASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 ECEL1P2-202ENST00000465689 757 ntBASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 AL031985.4-201ENST00000642138 673 ntBASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
COX4I2Q96KJ9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 FSCN1P1-201ENST00000568912 1481 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 KRT8P20-201ENST00000423953 1409 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 AC105020.1-201ENST00000435356 2205 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 AC026271.3-201ENST00000571884 352 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 DGCR10-201ENST00000609839 495 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 CROCCP2-202ENST00000412962 2773 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 PHGDH-210ENST00000641115 1638 ntBASIC16.56■□□□□ 0.24
COX4I2Q96KJ9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 AL136379.1-201ENST00000623471 2642 ntBASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COX4I2Q96KJ9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms