Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 MIR574-201ENST00000385209 96 ntBASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 PMS2P1-201ENST00000431037 1228 ntBASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 NKAPP1-205ENST00000585790 367 ntBASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 AC116407.3-201ENST00000623905 1129 ntBASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SH3RF2Q8TEC5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 AL096828.2-201ENST00000567259 1965 ntBASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 AC025062.2-201ENST00000605477 670 ntBASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 AL133373.2-201ENST00000623187 2828 ntBASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH3RF2Q8TEC5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 RPL13AP23-201ENST00000480739 586 ntBASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 AC122714.2-201ENST00000502787 707 ntBASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 OR7E14P-202ENST00000530490 1290 ntBASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH3RF2Q8TEC5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SH3RF2Q8TEC5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms