Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 FAAHP1-202ENST00000446499 1238 ntBASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 AC009533.2-201ENST00000543664 586 ntBASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 AC005336.2-201ENST00000593183 939 ntBASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 BNIP3P18-201ENST00000593976 575 ntBASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 AL591684.3-201ENST00000605187 298 ntBASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 CROCCP1-201ENST00000426910 5675 ntBASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM48Q8IWZ4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM48Q8IWZ4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TRIM48Q8IWZ4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM48Q8IWZ4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 AC114341.1-201ENST00000618070 349 ntBASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 AL096828.2-201ENST00000567259 1965 ntBASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM48Q8IWZ4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 AC090164.3-201ENST00000610780 2143 ntBASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.44■□□□□ 0.38
TRIM48Q8IWZ4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms