Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ST6GAL1-212ENST00000448408 1005 ntTSL 59.26□□□□□ -0.931e-9■□□□□ 10.3
LARP4Q71RC2 TJP2-203ENST00000377259 588 ntTSL 39.19□□□□□ -0.945e-6■□□□□ 10.3
LARP4Q71RC2 SNRPA1-212ENST00000560496 824 ntTSL 59.19□□□□□ -0.945e-6■□□□□ 10.3
LARP4Q71RC2 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.945e-6■□□□□ 10.3
LARP4Q71RC2 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.955e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-204ENST00000423451 602 ntTSL 48.78□□□□□ -11e-9■□□□□ 10.3
LARP4Q71RC2 AC008124.1-201ENST00000609803 9730 ntBASIC8.63□□□□□ -1.035e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-210ENST00000446170 588 ntTSL 48.52□□□□□ -1.051e-9■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-206ENST00000430309 504 ntTSL 48.24□□□□□ -1.091e-9■□□□□ 10.3
LARP4Q71RC2 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.19□□□□□ -1.11e-9■□□□□ 10.3
LARP4Q71RC2 CKAP5-204ENST00000525896 832 ntTSL 27.69□□□□□ -1.185e-6■□□□□ 10.3
LARP4Q71RC2 NOL7-203ENST00000474485 920 ntTSL 37.63□□□□□ -1.192e-7■□□□□ 10.3
LARP4Q71RC2 ADNP-205ENST00000534467 773 ntTSL 37.63□□□□□ -1.195e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-203ENST00000417392 707 ntTSL 27.56□□□□□ -1.21e-9■□□□□ 10.3
LARP4Q71RC2 ACBD6-205ENST00000496993 672 ntTSL 57.23□□□□□ -1.255e-6■□□□□ 10.3
LARP4Q71RC2 RPL17-213ENST00000581741 596 ntTSL 27.16□□□□□ -1.261e-32■□□□□ 10.3
LARP4Q71RC2 SPTA1-204ENST00000467387 465 ntTSL 56.9□□□□□ -1.35e-6■□□□□ 10.3
LARP4Q71RC2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.375e-6■□□□□ 10.3
LARP4Q71RC2 FIP1L1-206ENST00000507206 341 ntTSL 25.9□□□□□ -1.462e-12■□□□□ 10.3
LARP4Q71RC2 SNRPA1-209ENST00000560307 433 ntTSL 25.89□□□□□ -1.475e-6■□□□□ 10.3
LARP4Q71RC2 UBR5-205ENST00000519365 602 ntTSL 35.64□□□□□ -1.515e-6■□□□□ 10.3
LARP4Q71RC2 MRPS30-201ENST00000230914 4331 ntTSL 55.35□□□□□ -1.555e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-208ENST00000440338 568 ntTSL 45.24□□□□□ -1.571e-9■□□□□ 10.3
LARP4Q71RC2 FIP1L1-211ENST00000513008 1070 ntTSL 1 (best)5.21□□□□□ -1.582e-12■□□□□ 10.3
LARP4Q71RC2 UTP11-204ENST00000488453 1895 ntTSL 25.13□□□□□ -1.595e-6■□□□□ 10.3
LARP4Q71RC2 EIF5B-202ENST00000470023 2331 ntTSL 25.09□□□□□ -1.595e-6■□□□□ 10.3
LARP4Q71RC2 UBR5-208ENST00000520898 582 ntTSL 35.09□□□□□ -1.595e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-202ENST00000416235 577 ntTSL 24.79□□□□□ -1.641e-9■□□□□ 10.3
LARP4Q71RC2 FIP1L1-204ENST00000504094 2177 ntTSL 24.7□□□□□ -1.662e-12■□□□□ 10.3
LARP4Q71RC2 FIP1L1-213ENST00000514543 1465 ntTSL 54.5□□□□□ -1.692e-12■□□□□ 10.3
LARP4Q71RC2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.695e-6■□□□□ 10.3
LARP4Q71RC2 RPL17-214ENST00000582588 401 ntTSL 23.53□□□□□ -1.841e-32■□□□□ 10.3
LARP4Q71RC2 MYL12A-204ENST00000578038 463 ntTSL 35□□□□□ -1.619e-9■□□□□ 10.3
LARP4Q71RC2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.34■□□□□ 0.373e-14■□□□□ 10.3
LARP4Q71RC2 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.567e-13■□□□□ 10.3
LARP4Q71RC2 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)27.93■■■□□ 2.061e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.531e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.441e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.85■■□□□ 1.411e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.281e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-220ENST00000519767 970 ntTSL 1 (best)23.06■■□□□ 1.281e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.271e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.251e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.56■□□□□ 0.881e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-217ENST00000518538 535 ntTSL 220.32■□□□□ 0.841e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.7■□□□□ 0.421e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.95■□□□□ 0.31e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.281e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-221ENST00000520265 336 ntTSL 512.99□□□□□ -0.331e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.99□□□□□ -0.331e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.65□□□□□ -0.381e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.15□□□□□ -0.461e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.91□□□□□ -0.51e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.551e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-216ENST00000512683 475 ntTSL 1 (best)11.37□□□□□ -0.591e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.26□□□□□ -0.611e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.26□□□□□ -0.611e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.611e-25■□□□□ 10.3
LARP4Q71RC2 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.06□□□□□ -0.961e-25■□□□□ 10.3
LARP4Q71RC2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.74e-7■□□□□ 10.3
LARP4Q71RC2 GLRX5-203ENST00000557731 1863 ntTSL 514.29□□□□□ -0.124e-7■□□□□ 10.3
LARP4Q71RC2 GLRX5-202ENST00000553672 912 ntTSL 27.8□□□□□ -1.164e-7■□□□□ 10.3
LARP4Q71RC2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.023e-10■□□□□ 10.3
LARP4Q71RC2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.033e-10■□□□□ 10.3
LARP4Q71RC2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.053e-10■□□□□ 10.3
LARP4Q71RC2 MLXIPL-210ENST00000476404 1921 ntTSL 215.89■□□□□ 0.132e-16■□□□□ 10.3
LARP4Q71RC2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.73□□□□□ -0.052e-16■□□□□ 10.3
LARP4Q71RC2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.57□□□□□ -0.082e-16■□□□□ 10.3
LARP4Q71RC2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.112e-16■□□□□ 10.3
LARP4Q71RC2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.112e-16■□□□□ 10.3
LARP4Q71RC2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.132e-16■□□□□ 10.3
LARP4Q71RC2 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)13.49□□□□□ -0.252e-16■□□□□ 10.3
LARP4Q71RC2 F7-205ENST00000479674 767 ntTSL 521.35■■□□□ 1.011e-7■□□□□ 10.3
LARP4Q71RC2 F7-204ENST00000473085 558 ntTSL 416.44■□□□□ 0.221e-7■□□□□ 10.3
LARP4Q71RC2 RPS24-212ENST00000482069 539 ntTSL 310.15□□□□□ -0.782e-67■□□□□ 10.3
LARP4Q71RC2 RPS24-206ENST00000465692 778 ntTSL 29.13□□□□□ -0.952e-67■□□□□ 10.3
LARP4Q71RC2 RPS24-211ENST00000480662 711 ntTSL 29.13□□□□□ -0.952e-67■□□□□ 10.3
LARP4Q71RC2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.74■□□□□ 0.271e-22■□□□□ 10.3
LARP4Q71RC2 RRBP1-207ENST00000468428 2200 ntTSL 216.66■□□□□ 0.261e-22■□□□□ 10.3
LARP4Q71RC2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.011e-22■□□□□ 10.3
LARP4Q71RC2 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.281e-22■□□□□ 10.3
LARP4Q71RC2 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.411e-22■□□□□ 10.3
LARP4Q71RC2 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.541e-22■□□□□ 10.3
LARP4Q71RC2 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC11.51□□□□□ -0.571e-22■□□□□ 10.3
LARP4Q71RC2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.282e-14■□□□□ 10.3
LARP4Q71RC2 UXS1-215ENST00000497604 2907 ntTSL 26.64□□□□□ -1.352e-14■□□□□ 10.3
LARP4Q71RC2 LAMA5-212ENST00000495695 780 ntTSL 217.92■□□□□ 0.461e-13■□□□□ 10.3
LARP4Q71RC2 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)13.31□□□□□ -0.281e-13■□□□□ 10.3
LARP4Q71RC2 CCDC57-204ENST00000392345 678 ntAPPRIS ALT2 TSL 312.7□□□□□ -0.381e-7■□□□□ 10.3
LARP4Q71RC2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.23e-10■□□□□ 10.3
LARP4Q71RC2 RNASET2-204ENST00000421787 1924 ntTSL 220.22■□□□□ 0.833e-10■□□□□ 10.3
LARP4Q71RC2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.94■□□□□ 0.623e-10■□□□□ 10.3
LARP4Q71RC2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.14■□□□□ 0.493e-10■□□□□ 10.3
Retrieved 100 of 15,922 protein–RNA pairs in 231.2 ms