RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 AEBP2Q6ZN18 517 aaPredicted RBP23.6■■□□□ 1.37
SPTA1-204ENST00000467387 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
SPTA1-204ENST00000467387 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
SPTA1-204ENST00000467387 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
SPTA1-204ENST00000467387 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
SPTA1-204ENST00000467387 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
SPTA1-204ENST00000467387 FOXD1Q16676 465 aa18.57■□□□□ 0.56
SPTA1-204ENST00000467387 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
SPTA1-204ENST00000467387 ADRA2BP18089 450 aa17.84■□□□□ 0.45
SPTA1-204ENST00000467387 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
SPTA1-204ENST00000467387 MSH5O43196 834 aa17.11■□□□□ 0.33
SPTA1-204ENST00000467387 ABCC9O60706 1549 aa17.11■□□□□ 0.33
SPTA1-204ENST00000467387 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
SPTA1-204ENST00000467387 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
SPTA1-204ENST00000467387 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
SPTA1-204ENST00000467387 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
SPTA1-204ENST00000467387 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
SPTA1-204ENST00000467387 KCNA4P22459 653 aa16.11■□□□□ 0.17
SPTA1-204ENST00000467387 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
SPTA1-204ENST00000467387 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
SPTA1-204ENST00000467387 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
SPTA1-204ENST00000467387 NACADO15069 1562 aa16■□□□□ 0.15
SPTA1-204ENST00000467387 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
SPTA1-204ENST00000467387 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
SPTA1-204ENST00000467387 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPTA1-204ENST00000467387 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
SPTA1-204ENST00000467387 UNC13AQ9UPW8 1703 aa15.75■□□□□ 0.11
SPTA1-204ENST00000467387 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
SPTA1-204ENST00000467387 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
SPTA1-204ENST00000467387 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
SPTA1-204ENST00000467387 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
SPTA1-204ENST00000467387 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
SPTA1-204ENST00000467387 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
SPTA1-204ENST00000467387 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
SPTA1-204ENST00000467387 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
SPTA1-204ENST00000467387 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
SPTA1-204ENST00000467387 DCAF1Q9Y4B6 1507 aa15.42■□□□□ 0.06
SPTA1-204ENST00000467387 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
SPTA1-204ENST00000467387 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
SPTA1-204ENST00000467387 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
SPTA1-204ENST00000467387 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
SPTA1-204ENST00000467387 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
SPTA1-204ENST00000467387 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
SPTA1-204ENST00000467387 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
SPTA1-204ENST00000467387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.036e-8■■□□□ 13.1
SPTA1-204ENST00000467387 ERCC6Q03468 1493 aa14.85□□□□□ -0.03
SPTA1-204ENST00000467387 ZBTB22O15209 634 aa14.85□□□□□ -0.03
SPTA1-204ENST00000467387 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
SPTA1-204ENST00000467387 CUX2O14529 1486 aa14.8□□□□□ -0.04
SPTA1-204ENST00000467387 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
SPTA1-204ENST00000467387 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
SPTA1-204ENST00000467387 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
SPTA1-204ENST00000467387 SMARCA2P51531 1590 aa14.69□□□□□ -0.06
SPTA1-204ENST00000467387 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
SPTA1-204ENST00000467387 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
SPTA1-204ENST00000467387 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
SPTA1-204ENST00000467387 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
SPTA1-204ENST00000467387 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
SPTA1-204ENST00000467387 NESP48681 1621 aa14.61□□□□□ -0.07
SPTA1-204ENST00000467387 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
SPTA1-204ENST00000467387 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
SPTA1-204ENST00000467387 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
SPTA1-204ENST00000467387 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
SPTA1-204ENST00000467387 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
SPTA1-204ENST00000467387 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
SPTA1-204ENST00000467387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
SPTA1-204ENST00000467387 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
SPTA1-204ENST00000467387 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
SPTA1-204ENST00000467387 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
SPTA1-204ENST00000467387 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
SPTA1-204ENST00000467387 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
SPTA1-204ENST00000467387 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
SPTA1-204ENST00000467387 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
SPTA1-204ENST00000467387 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
SPTA1-204ENST00000467387 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
SPTA1-204ENST00000467387 APLP2Q06481 763 aa14.29□□□□□ -0.12
SPTA1-204ENST00000467387 WDR62O43379 1518 aa14.27□□□□□ -0.12
SPTA1-204ENST00000467387 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
SPTA1-204ENST00000467387 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
SPTA1-204ENST00000467387 WIZO95785 1651 aa14.24□□□□□ -0.13
SPTA1-204ENST00000467387 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
SPTA1-204ENST00000467387 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
SPTA1-204ENST00000467387 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
SPTA1-204ENST00000467387 CAPN15O75808 1086 aa14.15□□□□□ -0.14
SPTA1-204ENST00000467387 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
SPTA1-204ENST00000467387 CFTRP13569 1480 aa14.1□□□□□ -0.15
SPTA1-204ENST00000467387 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
SPTA1-204ENST00000467387 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
SPTA1-204ENST00000467387 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
SPTA1-204ENST00000467387 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
SPTA1-204ENST00000467387 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
SPTA1-204ENST00000467387 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
SPTA1-204ENST00000467387 DSG3P32926 999 aa13.96□□□□□ -0.17
SPTA1-204ENST00000467387 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
SPTA1-204ENST00000467387 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
SPTA1-204ENST00000467387 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
SPTA1-204ENST00000467387 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
SPTA1-204ENST00000467387 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
SPTA1-204ENST00000467387 ABCB7O75027 752 aa13.91□□□□□ -0.18
SPTA1-204ENST00000467387 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms