Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATXN3P54252 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATXN3P54252 IL9RP2-201ENST00000423948 1312 ntBASIC18.21■□□□□ 0.51
ATXN3P54252 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ATXN3P54252 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ATXN3P54252 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATXN3P54252 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.2■□□□□ 0.5
ATXN3P54252 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATXN3P54252 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATXN3P54252 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 AKR1C7P-201ENST00000305623 895 ntBASIC18.2■□□□□ 0.5
ATXN3P54252 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 IGHGP-201ENST00000390555 1178 ntBASIC18.2■□□□□ 0.5
ATXN3P54252 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.2■□□□□ 0.5
ATXN3P54252 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATXN3P54252 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.2■□□□□ 0.5
ATXN3P54252 AC092865.5-201ENST00000545435 363 ntBASIC18.2■□□□□ 0.5
ATXN3P54252 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.2■□□□□ 0.5
ATXN3P54252 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATXN3P54252 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 ANO7L1-203ENST00000602586 1720 ntBASIC18.2■□□□□ 0.5
ATXN3P54252 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.2■□□□□ 0.5
ATXN3P54252 AC139713.2-201ENST00000641328 2723 ntBASIC18.2■□□□□ 0.5
ATXN3P54252 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATXN3P54252 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.19■□□□□ 0.5
ATXN3P54252 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.19■□□□□ 0.5
ATXN3P54252 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.19■□□□□ 0.5
ATXN3P54252 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ATXN3P54252 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 MIR574-201ENST00000385209 96 ntBASIC18.19■□□□□ 0.5
ATXN3P54252 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ATXN3P54252 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 FAM197Y8-203ENST00000450145 560 ntBASIC18.19■□□□□ 0.5
ATXN3P54252 AF186996.4-201ENST00000467186 377 ntBASIC18.19■□□□□ 0.5
ATXN3P54252 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.19■□□□□ 0.5
ATXN3P54252 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.19■□□□□ 0.5
ATXN3P54252 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.19■□□□□ 0.5
ATXN3P54252 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.19■□□□□ 0.5
ATXN3P54252 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.19■□□□□ 0.5
ATXN3P54252 AC009065.1-201ENST00000564055 1225 ntBASIC18.19■□□□□ 0.5
ATXN3P54252 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
ATXN3P54252 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.19■□□□□ 0.5
ATXN3P54252 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ATXN3P54252 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
ATXN3P54252 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATXN3P54252 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATXN3P54252 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATXN3P54252 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.18■□□□□ 0.5
ATXN3P54252 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ATXN3P54252 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.18■□□□□ 0.5
ATXN3P54252 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
ATXN3P54252 MIR1233-2-201ENST00000408138 82 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 MIR1233-1-201ENST00000408722 82 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 AF238378.1-201ENST00000526806 358 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 KRT18P58-201ENST00000527480 1120 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.18■□□□□ 0.5
ATXN3P54252 MIR3180-4-201ENST00000582223 153 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 AL671883.3-201ENST00000603274 991 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.18■□□□□ 0.5
ATXN3P54252 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.18■□□□□ 0.5
ATXN3P54252 AC034236.2-201ENST00000606662 1610 ntBASIC18.18■□□□□ 0.5
ATXN3P54252 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
ATXN3P54252 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATXN3P54252 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATXN3P54252 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms