Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.687e-8■□□□□ 10.8
NCBP2P52298 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.687e-8■□□□□ 10.8
NCBP2P52298 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.88□□□□□ -1.797e-8■□□□□ 10.8
NCBP2P52298 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.797e-8■□□□□ 10.8
NCBP2P52298 PIGN-215ENST00000590765 558 ntTSL 43.82□□□□□ -1.87e-8■□□□□ 10.8
NCBP2P52298 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.67□□□□□ -1.827e-8■□□□□ 10.8
NCBP2P52298 PIGN-205ENST00000585923 551 ntTSL 42.69□□□□□ -1.987e-8■□□□□ 10.8
NCBP2P52298 YWHAQ-203ENST00000446619 665 ntTSL 319.39■□□□□ 0.694e-7■□□□□ 10.8
NCBP2P52298 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.254e-7■□□□□ 10.8
NCBP2P52298 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.77■□□□□ 0.67e-22■□□□□ 10.8
NCBP2P52298 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.377e-22■□□□□ 10.8
NCBP2P52298 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)13.44□□□□□ -0.267e-22■□□□□ 10.8
NCBP2P52298 ZNF507-202ENST00000355898 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.963e-10■□□□□ 10.8
NCBP2P52298 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.033e-10■□□□□ 10.8
NCBP2P52298 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.57□□□□□ -1.363e-10■□□□□ 10.8
NCBP2P52298 ZNF507-205ENST00000587084 5560 ntTSL 1 (best)5.21□□□□□ -1.583e-10■□□□□ 10.8
NCBP2P52298 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.22e-6■□□□□ 10.8
NCBP2P52298 NXF1-210ENST00000531579 590 ntTSL 413.78□□□□□ -0.22e-6■□□□□ 10.8
NCBP2P52298 NXF1-204ENST00000527064 572 ntTSL 213.31□□□□□ -0.282e-6■□□□□ 10.8
NCBP2P52298 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.282e-6■□□□□ 10.8
NCBP2P52298 NXF1-207ENST00000530875 1922 ntTSL 1 (best)13.11□□□□□ -0.312e-6■□□□□ 10.8
NCBP2P52298 TM9SF4-204ENST00000442842 563 ntTSL 412.7□□□□□ -0.382e-6■□□□□ 10.8
NCBP2P52298 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC11.88□□□□□ -0.512e-6■□□□□ 10.8
NCBP2P52298 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC10.81□□□□□ -0.682e-6■□□□□ 10.8
NCBP2P52298 NXF1-202ENST00000525576 572 ntTSL 410.56□□□□□ -0.722e-6■□□□□ 10.8
NCBP2P52298 NXF1-203ENST00000526163 569 ntTSL 410.56□□□□□ -0.722e-6■□□□□ 10.8
NCBP2P52298 NXF1-208ENST00000531131 1023 ntTSL 2 BASIC10.56□□□□□ -0.722e-6■□□□□ 10.8
NCBP2P52298 TM9SF4-203ENST00000417389 553 ntTSL 410.24□□□□□ -0.772e-6■□□□□ 10.8
NCBP2P52298 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.482e-6■□□□□ 10.8
NCBP2P52298 TM9SF4-205ENST00000450829 550 ntTSL 45.44□□□□□ -1.542e-6■□□□□ 10.8
NCBP2P52298 SRSF10-212ENST00000485292 790 ntTSL 212.82□□□□□ -0.361e-13■□□□□ 10.8
NCBP2P52298 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.72□□□□□ -0.371e-13■□□□□ 10.8
NCBP2P52298 SRSF10-202ENST00000341154 2839 ntTSL 211.43□□□□□ -0.581e-13■□□□□ 10.8
NCBP2P52298 SRSF10-203ENST00000343255 2917 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.741e-13■□□□□ 10.8
NCBP2P52298 SRSF10-214ENST00000492112 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.761e-13■□□□□ 10.8
NCBP2P52298 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC10.15□□□□□ -0.781e-13■□□□□ 10.8
NCBP2P52298 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.72□□□□□ -1.011e-13■□□□□ 10.8
NCBP2P52298 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC8.53□□□□□ -1.041e-13■□□□□ 10.8
NCBP2P52298 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC7.29□□□□□ -1.241e-13■□□□□ 10.8
NCBP2P52298 SRSF10-210ENST00000473858 778 ntTSL 26.83□□□□□ -1.321e-13■□□□□ 10.8
NCBP2P52298 SRSF10-215ENST00000495785 1390 ntTSL 56.53□□□□□ -1.361e-13■□□□□ 10.8
NCBP2P52298 MSH6-207ENST00000456246 846 ntTSL 316.33■□□□□ 0.21e-9■□□□□ 10.8
NCBP2P52298 MSH6-208ENST00000493177 813 ntTSL 312.56□□□□□ -0.41e-9■□□□□ 10.8
NCBP2P52298 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.38□□□□□ -0.431e-9■□□□□ 10.8
NCBP2P52298 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.34□□□□□ -0.431e-9■□□□□ 10.8
NCBP2P52298 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.33□□□□□ -0.441e-9■□□□□ 10.8
NCBP2P52298 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC11.99□□□□□ -0.491e-9■□□□□ 10.8
NCBP2P52298 MSH6-204ENST00000445503 4158 ntTSL 1 (best)11.31□□□□□ -0.61e-9■□□□□ 10.8
NCBP2P52298 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.691e-9■□□□□ 10.8
NCBP2P52298 MSH6-211ENST00000606499 833 ntTSL 37.18□□□□□ -1.261e-9■□□□□ 10.8
NCBP2P52298 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 19e-9■□□□□ 10.7
NCBP2P52298 GPBP1L1-207ENST00000480083 964 ntTSL 219.97■□□□□ 0.792e-12■□□□□ 10.7
NCBP2P52298 BMP2K-202ENST00000389010 2741 ntTSL 1 (best)19.6■□□□□ 0.739e-9■□□□□ 10.7
NCBP2P52298 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.49e-9■□□□□ 10.7
NCBP2P52298 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.059e-9■□□□□ 10.7
NCBP2P52298 GPBP1L1-210ENST00000488278 995 ntTSL 213.19□□□□□ -0.32e-12■□□□□ 10.7
NCBP2P52298 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.18□□□□□ -0.469e-9■□□□□ 10.7
NCBP2P52298 GPBP1L1-202ENST00000355105 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.752e-12■□□□□ 10.7
NCBP2P52298 GPBP1L1-208ENST00000480941 850 ntTSL 28.04□□□□□ -1.122e-12■□□□□ 10.7
NCBP2P52298 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.142e-12■□□□□ 10.7
NCBP2P52298 GPBP1L1-203ENST00000460859 559 ntTSL 22.5□□□□□ -2.012e-12■□□□□ 10.7
NCBP2P52298 GPBP1L1-211ENST00000493083 725 ntTSL 22.5□□□□□ -2.012e-12■□□□□ 10.7
NCBP2P52298 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.234e-7■□□□□ 10.7
NCBP2P52298 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 312.86□□□□□ -0.351e-6■□□□□ 10.7
NCBP2P52298 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.421e-6■□□□□ 10.7
NCBP2P52298 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.616e-7■□□□□ 10.7
NCBP2P52298 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.263e-9■□□□□ 10.7
NCBP2P52298 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.48□□□□□ -2.173e-9■□□□□ 10.7
NCBP2P52298 CKAP5-203ENST00000525248 698 ntTSL 38.33□□□□□ -1.085e-7■□□□□ 10.7
NCBP2P52298 AL365205.1-201ENST00000456057 3947 ntTSL 215.49■□□□□ 0.071e-8■□□□□ 10.7
NCBP2P52298 AL365205.1-203ENST00000335515 2871 ntTSL 212.98□□□□□ -0.331e-8■□□□□ 10.7
NCBP2P52298 AL365205.1-202ENST00000487182 3043 ntTSL 211.93□□□□□ -0.51e-8■□□□□ 10.7
NCBP2P52298 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.261e-8■□□□□ 10.7
NCBP2P52298 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.511e-8■□□□□ 10.7
NCBP2P52298 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.996e-13■□□□□ 10.7
NCBP2P52298 PRODH2-202ENST00000587695 1956 ntTSL 217.06■□□□□ 0.328e-9■□□□□ 10.7
NCBP2P52298 PRODH2-206ENST00000591694 728 ntTSL 316.01■□□□□ 0.158e-9■□□□□ 10.7
NCBP2P52298 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.18e-9■□□□□ 10.7
NCBP2P52298 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.48□□□□□ -0.411e-12■□□□□ 10.7
NCBP2P52298 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.81e-12■□□□□ 10.7
NCBP2P52298 FBXL21-204ENST00000475169 611 ntTSL 217.11■□□□□ 0.335e-6■□□□□ 10.7
NCBP2P52298 FBXL21-208ENST00000635168 2693 ntTSL 515.79■□□□□ 0.125e-6■□□□□ 10.7
NCBP2P52298 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.52■□□□□ 0.085e-6■□□□□ 10.7
NCBP2P52298 FBXL21-203ENST00000472159 768 ntTSL 213.77□□□□□ -0.215e-6■□□□□ 10.7
NCBP2P52298 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.45□□□□□ -0.265e-6■□□□□ 10.7
NCBP2P52298 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.816e-8■□□□□ 10.7
NCBP2P52298 HAUS4-207ENST00000553794 570 ntTSL 519.64■□□□□ 0.736e-8■□□□□ 10.7
NCBP2P52298 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.726e-8■□□□□ 10.7
NCBP2P52298 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.47■□□□□ 0.716e-8■□□□□ 10.7
NCBP2P52298 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.616e-8■□□□□ 10.7
NCBP2P52298 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.4■□□□□ 0.546e-8■□□□□ 10.7
NCBP2P52298 HAUS4-215ENST00000554651 815 ntTSL 318.06■□□□□ 0.486e-8■□□□□ 10.7
NCBP2P52298 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.69■□□□□ 0.426e-8■□□□□ 10.7
NCBP2P52298 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.66■□□□□ 0.426e-8■□□□□ 10.7
NCBP2P52298 HAUS4-214ENST00000554516 983 ntTSL 216.81■□□□□ 0.286e-8■□□□□ 10.7
NCBP2P52298 HAUS4-216ENST00000555040 1107 ntTSL 215.65■□□□□ 0.16e-8■□□□□ 10.7
NCBP2P52298 HAUS4-212ENST00000554406 652 ntTSL 513.06□□□□□ -0.326e-8■□□□□ 10.7
NCBP2P52298 HAUS4-220ENST00000556915 578 ntTSL 311.52□□□□□ -0.576e-8■□□□□ 10.7
NCBP2P52298 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.876e-8■□□□□ 10.7
NCBP2P52298 HAUS4-210ENST00000554349 750 ntTSL 39.53□□□□□ -0.886e-8■□□□□ 10.7
Retrieved 100 of 18,329 protein–RNA pairs in 323.6 ms