RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
CKAP5-203ENST00000525248 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
CKAP5-203ENST00000525248 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CKAP5-203ENST00000525248 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
CKAP5-203ENST00000525248 NISCHQ9Y2I1 1504 aa22.9■■□□□ 1.26
CKAP5-203ENST00000525248 FOXD1Q16676 465 aa21.34■■□□□ 1.01
CKAP5-203ENST00000525248 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
CKAP5-203ENST00000525248 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
CKAP5-203ENST00000525248 ABCC9O60706 1549 aa20.46■□□□□ 0.87
CKAP5-203ENST00000525248 ADRA2BP18089 450 aa20.38■□□□□ 0.85
CKAP5-203ENST00000525248 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
CKAP5-203ENST00000525248 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
CKAP5-203ENST00000525248 MSH5O43196 834 aa19.73■□□□□ 0.75
CKAP5-203ENST00000525248 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
CKAP5-203ENST00000525248 NACADO15069 1562 aa19.34■□□□□ 0.69
CKAP5-203ENST00000525248 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
CKAP5-203ENST00000525248 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
CKAP5-203ENST00000525248 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
CKAP5-203ENST00000525248 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
CKAP5-203ENST00000525248 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
CKAP5-203ENST00000525248 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
CKAP5-203ENST00000525248 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
CKAP5-203ENST00000525248 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
CKAP5-203ENST00000525248 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
CKAP5-203ENST00000525248 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
CKAP5-203ENST00000525248 PPP4R3CPQ6ZMV5 832 aa18.65■□□□□ 0.58
CKAP5-203ENST00000525248 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
CKAP5-203ENST00000525248 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
CKAP5-203ENST00000525248 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
CKAP5-203ENST00000525248 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
CKAP5-203ENST00000525248 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
CKAP5-203ENST00000525248 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
CKAP5-203ENST00000525248 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
CKAP5-203ENST00000525248 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
CKAP5-203ENST00000525248 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
CKAP5-203ENST00000525248 KCNA4P22459 653 aa18.01■□□□□ 0.47
CKAP5-203ENST00000525248 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
CKAP5-203ENST00000525248 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
CKAP5-203ENST00000525248 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
CKAP5-203ENST00000525248 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
CKAP5-203ENST00000525248 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
CKAP5-203ENST00000525248 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
CKAP5-203ENST00000525248 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
CKAP5-203ENST00000525248 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
CKAP5-203ENST00000525248 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
CKAP5-203ENST00000525248 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
CKAP5-203ENST00000525248 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
CKAP5-203ENST00000525248 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
CKAP5-203ENST00000525248 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
CKAP5-203ENST00000525248 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
CKAP5-203ENST00000525248 NESP48681 1621 aa17.6■□□□□ 0.41
CKAP5-203ENST00000525248 CUX2O14529 1486 aa17.54■□□□□ 0.4
CKAP5-203ENST00000525248 WIZO95785 1651 aa17.46■□□□□ 0.39
CKAP5-203ENST00000525248 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
CKAP5-203ENST00000525248 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
CKAP5-203ENST00000525248 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
CKAP5-203ENST00000525248 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
CKAP5-203ENST00000525248 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
CKAP5-203ENST00000525248 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
CKAP5-203ENST00000525248 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
CKAP5-203ENST00000525248 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
CKAP5-203ENST00000525248 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
CKAP5-203ENST00000525248 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
CKAP5-203ENST00000525248 WDR62O43379 1518 aa17.18■□□□□ 0.34
CKAP5-203ENST00000525248 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
CKAP5-203ENST00000525248 CFTRP13569 1480 aa17.15■□□□□ 0.34
CKAP5-203ENST00000525248 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
CKAP5-203ENST00000525248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
CKAP5-203ENST00000525248 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
CKAP5-203ENST00000525248 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
CKAP5-203ENST00000525248 PRDM2Q13029 1718 aa17■□□□□ 0.31
CKAP5-203ENST00000525248 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
CKAP5-203ENST00000525248 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
CKAP5-203ENST00000525248 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
CKAP5-203ENST00000525248 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
CKAP5-203ENST00000525248 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
CKAP5-203ENST00000525248 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
CKAP5-203ENST00000525248 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
CKAP5-203ENST00000525248 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
CKAP5-203ENST00000525248 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
CKAP5-203ENST00000525248 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
CKAP5-203ENST00000525248 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
CKAP5-203ENST00000525248 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
CKAP5-203ENST00000525248 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
CKAP5-203ENST00000525248 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
CKAP5-203ENST00000525248 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
CKAP5-203ENST00000525248 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
CKAP5-203ENST00000525248 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.255e-7■■■■■ 28.9
CKAP5-203ENST00000525248 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
CKAP5-203ENST00000525248 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
CKAP5-203ENST00000525248 CUX1P39880 1505 aa16.61■□□□□ 0.25
CKAP5-203ENST00000525248 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
CKAP5-203ENST00000525248 CHD1O14646 1710 aa16.57■□□□□ 0.24
CKAP5-203ENST00000525248 SOGA1O94964 1423 aa16.57■□□□□ 0.24
CKAP5-203ENST00000525248 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
CKAP5-203ENST00000525248 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
CKAP5-203ENST00000525248 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
CKAP5-203ENST00000525248 ZBTB22O15209 634 aa16.56■□□□□ 0.24
CKAP5-203ENST00000525248 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
CKAP5-203ENST00000525248 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms