RNA–Protein interactions for RNA: ENST00000473858.5

SRSF10-210, Transcript of serine and arginine rich splicing factor 10, humanhuman

TSL 2

Gene SRSF10, Length 778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF10-210ENST00000473858 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
SRSF10-210ENST00000473858 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
SRSF10-210ENST00000473858 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
SRSF10-210ENST00000473858 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
SRSF10-210ENST00000473858 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
SRSF10-210ENST00000473858 ABCC9O60706 1549 aa20.33■□□□□ 0.85
SRSF10-210ENST00000473858 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
SRSF10-210ENST00000473858 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
SRSF10-210ENST00000473858 FOXD1Q16676 465 aa19.25■□□□□ 0.67
SRSF10-210ENST00000473858 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
SRSF10-210ENST00000473858 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.62
SRSF10-210ENST00000473858 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
SRSF10-210ENST00000473858 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
SRSF10-210ENST00000473858 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
SRSF10-210ENST00000473858 NACADO15069 1562 aa18.55■□□□□ 0.56
SRSF10-210ENST00000473858 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
SRSF10-210ENST00000473858 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
SRSF10-210ENST00000473858 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
SRSF10-210ENST00000473858 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
SRSF10-210ENST00000473858 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
SRSF10-210ENST00000473858 ADRA2BP18089 450 aa18.13■□□□□ 0.49
SRSF10-210ENST00000473858 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
SRSF10-210ENST00000473858 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
SRSF10-210ENST00000473858 MSH5O43196 834 aa18.06■□□□□ 0.48
SRSF10-210ENST00000473858 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
SRSF10-210ENST00000473858 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
SRSF10-210ENST00000473858 CUX2O14529 1486 aa17.84■□□□□ 0.45
SRSF10-210ENST00000473858 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
SRSF10-210ENST00000473858 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
SRSF10-210ENST00000473858 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
SRSF10-210ENST00000473858 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
SRSF10-210ENST00000473858 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
SRSF10-210ENST00000473858 NESP48681 1621 aa17.26■□□□□ 0.35
SRSF10-210ENST00000473858 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
SRSF10-210ENST00000473858 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
SRSF10-210ENST00000473858 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
SRSF10-210ENST00000473858 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
SRSF10-210ENST00000473858 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
SRSF10-210ENST00000473858 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
SRSF10-210ENST00000473858 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
SRSF10-210ENST00000473858 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
SRSF10-210ENST00000473858 LAMC3Q9Y6N6 1575 aa16.9■□□□□ 0.3
SRSF10-210ENST00000473858 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
SRSF10-210ENST00000473858 RIMBP3CA6NJZ7 1639 aa16.84■□□□□ 0.29
SRSF10-210ENST00000473858 RIMBP3BA6NNM3 1639 aa16.84■□□□□ 0.29
SRSF10-210ENST00000473858 RIMBP3Q9UFD9 1639 aa16.84■□□□□ 0.29
SRSF10-210ENST00000473858 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SRSF10-210ENST00000473858 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
SRSF10-210ENST00000473858 WDR62O43379 1518 aa16.76■□□□□ 0.27
SRSF10-210ENST00000473858 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
SRSF10-210ENST00000473858 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
SRSF10-210ENST00000473858 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SRSF10-210ENST00000473858 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
SRSF10-210ENST00000473858 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
SRSF10-210ENST00000473858 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
SRSF10-210ENST00000473858 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
SRSF10-210ENST00000473858 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
SRSF10-210ENST00000473858 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
SRSF10-210ENST00000473858 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
SRSF10-210ENST00000473858 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
SRSF10-210ENST00000473858 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
SRSF10-210ENST00000473858 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
SRSF10-210ENST00000473858 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
SRSF10-210ENST00000473858 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
SRSF10-210ENST00000473858 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
SRSF10-210ENST00000473858 ILDR1Q86SU0 546 aaPredicted RBP16.35■□□□□ 0.21
SRSF10-210ENST00000473858 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
SRSF10-210ENST00000473858 CHD1O14646 1710 aa16.25■□□□□ 0.19
SRSF10-210ENST00000473858 CFTRP13569 1480 aa16.22■□□□□ 0.19
SRSF10-210ENST00000473858 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
SRSF10-210ENST00000473858 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
SRSF10-210ENST00000473858 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
SRSF10-210ENST00000473858 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
SRSF10-210ENST00000473858 WIZO95785 1651 aa16.15■□□□□ 0.18
SRSF10-210ENST00000473858 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
SRSF10-210ENST00000473858 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■■□□ 18.9
SRSF10-210ENST00000473858 FBLN2P98095 1184 aa16.04■□□□□ 0.16
SRSF10-210ENST00000473858 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
SRSF10-210ENST00000473858 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
SRSF10-210ENST00000473858 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
SRSF10-210ENST00000473858 PRDM2Q13029 1718 aa16■□□□□ 0.15
SRSF10-210ENST00000473858 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
SRSF10-210ENST00000473858 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
SRSF10-210ENST00000473858 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
SRSF10-210ENST00000473858 KIF13AQ9H1H9 1805 aa15.88■□□□□ 0.13
SRSF10-210ENST00000473858 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
SRSF10-210ENST00000473858 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
SRSF10-210ENST00000473858 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
SRSF10-210ENST00000473858 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
SRSF10-210ENST00000473858 SNAPC4Q5SXM2 1469 aa15.82■□□□□ 0.12
SRSF10-210ENST00000473858 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
SRSF10-210ENST00000473858 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
SRSF10-210ENST00000473858 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
SRSF10-210ENST00000473858 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
SRSF10-210ENST00000473858 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
SRSF10-210ENST00000473858 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
SRSF10-210ENST00000473858 CHMP7Q8WUX9 453 aaPredicted RBP15.76■□□□□ 0.11
SRSF10-210ENST00000473858 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
SRSF10-210ENST00000473858 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
SRSF10-210ENST00000473858 SYNJ2O15056 1496 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms