Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL049597.2-201ENST00000565575 961 ntBASIC16.57■□□□□ 0.24
RNF144AP50876 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 NTF6B-201ENST00000591913 560 ntBASIC16.57■□□□□ 0.24
RNF144AP50876 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF144AP50876 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF144AP50876 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF144AP50876 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF144AP50876 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF144AP50876 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 FAM210CP-201ENST00000445714 574 ntBASIC16.56■□□□□ 0.24
RNF144AP50876 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF144AP50876 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF144AP50876 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF144AP50876 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RNF144AP50876 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF144AP50876 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF144AP50876 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF144AP50876 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF144AP50876 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF144AP50876 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RNF144AP50876 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF144AP50876 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RNF144AP50876 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF144AP50876 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.55■□□□□ 0.24
RNF144AP50876 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF144AP50876 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF144AP50876 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
RNF144AP50876 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF144AP50876 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF144AP50876 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF144AP50876 AC005332.3-201ENST00000589904 676 ntBASIC16.54■□□□□ 0.24
RNF144AP50876 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF144AP50876 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms