Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYN1P17600 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYN1P17600 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYN1P17600 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYN1P17600 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYN1P17600 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.25■□□□□ 0.67
SYN1P17600 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYN1P17600 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SYN1P17600 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SYN1P17600 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 AP002414.1-201ENST00000391405 1147 ntBASIC19.24■□□□□ 0.67
SYN1P17600 ADH5P3-201ENST00000433842 1137 ntBASIC19.24■□□□□ 0.67
SYN1P17600 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 CXCL1P1-201ENST00000502804 216 ntBASIC19.24■□□□□ 0.67
SYN1P17600 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.24■□□□□ 0.67
SYN1P17600 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.24■□□□□ 0.67
SYN1P17600 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.24■□□□□ 0.67
SYN1P17600 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.24■□□□□ 0.67
SYN1P17600 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 TUBB3P1-201ENST00000405796 1332 ntBASIC19.24■□□□□ 0.67
SYN1P17600 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYN1P17600 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SYN1P17600 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 AFG3L1P-217ENST00000557444 2447 ntBASIC19.23■□□□□ 0.67
SYN1P17600 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.23■□□□□ 0.67
SYN1P17600 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.23■□□□□ 0.67
SYN1P17600 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.23■□□□□ 0.67
SYN1P17600 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.23■□□□□ 0.67
SYN1P17600 SLC25A39P2-201ENST00000537614 270 ntBASIC19.23■□□□□ 0.67
SYN1P17600 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.23■□□□□ 0.67
SYN1P17600 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.23■□□□□ 0.67
SYN1P17600 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SYN1P17600 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYN1P17600 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.23■□□□□ 0.67
SYN1P17600 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYN1P17600 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYN1P17600 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
SYN1P17600 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.22■□□□□ 0.67
SYN1P17600 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.22■□□□□ 0.67
SYN1P17600 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.22■□□□□ 0.67
SYN1P17600 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.22■□□□□ 0.67
SYN1P17600 DDX43P3-201ENST00000441064 443 ntBASIC19.22■□□□□ 0.67
SYN1P17600 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.22■□□□□ 0.67
SYN1P17600 KRT8P48-201ENST00000515599 1220 ntBASIC19.22■□□□□ 0.67
SYN1P17600 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.22■□□□□ 0.67
SYN1P17600 AC112191.1-201ENST00000523689 701 ntBASIC19.22■□□□□ 0.67
SYN1P17600 AL390754.1-201ENST00000619088 582 ntBASIC19.22■□□□□ 0.67
SYN1P17600 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SYN1P17600 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.22■□□□□ 0.67
SYN1P17600 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 AL049757.1-201ENST00000616842 1596 ntBASIC19.22■□□□□ 0.67
SYN1P17600 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SYN1P17600 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.22■□□□□ 0.67
SYN1P17600 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYN1P17600 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.21■□□□□ 0.67
SYN1P17600 FO538757.1-201ENST00000623083 1397 ntBASIC19.21■□□□□ 0.67
SYN1P17600 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYN1P17600 AC073130.3-201ENST00000624389 2278 ntBASIC19.21■□□□□ 0.67
SYN1P17600 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYN1P17600 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYN1P17600 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYN1P17600 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYN1P17600 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms