Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.97■□□□□ 0.63
FAM228BP0C875 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.97■□□□□ 0.63
FAM228BP0C875 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 COX11P1-201ENST00000489116 835 ntBASIC18.97■□□□□ 0.63
FAM228BP0C875 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FAM228BP0C875 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.97■□□□□ 0.63
FAM228BP0C875 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.97■□□□□ 0.63
FAM228BP0C875 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.97■□□□□ 0.63
FAM228BP0C875 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FAM228BP0C875 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
FAM228BP0C875 AC084018.2-201ENST00000613093 2607 ntBASIC18.97■□□□□ 0.63
FAM228BP0C875 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FAM228BP0C875 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.96■□□□□ 0.63
FAM228BP0C875 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.96■□□□□ 0.63
FAM228BP0C875 NKILA-202ENST00000614771 2598 ntBASIC18.96■□□□□ 0.63
FAM228BP0C875 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.96■□□□□ 0.63
FAM228BP0C875 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.96■□□□□ 0.63
FAM228BP0C875 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 AC011676.5-201ENST00000624864 2660 ntBASIC18.96■□□□□ 0.63
FAM228BP0C875 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
FAM228BP0C875 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.96■□□□□ 0.63
FAM228BP0C875 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.96■□□□□ 0.63
FAM228BP0C875 AC092597.1-201ENST00000487352 616 ntBASIC18.96■□□□□ 0.63
FAM228BP0C875 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.96■□□□□ 0.63
FAM228BP0C875 AC112698.1-201ENST00000510299 916 ntBASIC18.96■□□□□ 0.63
FAM228BP0C875 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FAM228BP0C875 AC011558.1-201ENST00000623459 338 ntBASIC18.96■□□□□ 0.63
FAM228BP0C875 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.96■□□□□ 0.63
FAM228BP0C875 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FAM228BP0C875 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 STARP1-201ENST00000397973 869 ntBASIC18.95■□□□□ 0.62
FAM228BP0C875 KRT18P48-201ENST00000434763 852 ntBASIC18.95■□□□□ 0.62
FAM228BP0C875 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.95■□□□□ 0.62
FAM228BP0C875 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.95■□□□□ 0.62
FAM228BP0C875 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 AC066615.1-201ENST00000640911 628 ntBASIC18.95■□□□□ 0.62
FAM228BP0C875 AL031432.5-201ENST00000641059 760 ntBASIC18.95■□□□□ 0.62
FAM228BP0C875 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.95■□□□□ 0.62
FAM228BP0C875 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.95■□□□□ 0.62
FAM228BP0C875 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FAM228BP0C875 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
FAM228BP0C875 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FAM228BP0C875 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.94■□□□□ 0.62
FAM228BP0C875 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM228BP0C875 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM228BP0C875 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms