Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CXCL1P09341 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CXCL1P09341 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL1P09341 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.82□□□□□ -0.2
CXCL1P09341 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CXCL1P09341 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
CXCL1P09341 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL1P09341 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL1P09341 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL1P09341 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL1P09341 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 AC120498.8-201ENST00000614275 531 ntBASIC13.82□□□□□ -0.2
CXCL1P09341 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCL1P09341 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 AC092368.3-202ENST00000574180 1591 ntBASIC13.82□□□□□ -0.2
CXCL1P09341 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL1P09341 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL1P09341 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CXCL1P09341 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL1P09341 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL1P09341 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL1P09341 MIPEPP3-201ENST00000412105 444 ntBASIC13.81□□□□□ -0.2
CXCL1P09341 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL1P09341 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL1P09341 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL1P09341 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL1P09341 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL1P09341 AC060766.5-201ENST00000590539 871 ntBASIC13.81□□□□□ -0.2
CXCL1P09341 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 AC099063.4-201ENST00000641099 1602 ntBASIC13.81□□□□□ -0.2
CXCL1P09341 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL1P09341 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL1P09341 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.81□□□□□ -0.2
CXCL1P09341 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CXCL1P09341 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms