Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 AL355306.1-201ENST00000415580 579 ntBASIC10.99□□□□□ -0.65
APOBP04114 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 FAM86GP-201ENST00000448322 971 ntBASIC10.99□□□□□ -0.65
APOBP04114 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 SNX12-206ENST00000622259 661 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 AC006116.8-202ENST00000587620 1550 ntBASIC10.99□□□□□ -0.65
APOBP04114 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
APOBP04114 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 COX5BP2-201ENST00000392354 334 ntBASIC10.99□□□□□ -0.65
APOBP04114 SLC25A6P2-201ENST00000497974 877 ntBASIC10.99□□□□□ -0.65
APOBP04114 AL033527.4-201ENST00000641026 673 ntBASIC10.99□□□□□ -0.65
APOBP04114 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.99□□□□□ -0.65
APOBP04114 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.98□□□□□ -0.65
APOBP04114 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 ESPNP-201ENST00000270691 2015 ntBASIC10.98□□□□□ -0.65
APOBP04114 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 AC093010.1-201ENST00000473625 1624 ntBASIC10.98□□□□□ -0.65
APOBP04114 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.98□□□□□ -0.65
APOBP04114 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.98□□□□□ -0.65
APOBP04114 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.98□□□□□ -0.65
APOBP04114 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.98□□□□□ -0.65
APOBP04114 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.98□□□□□ -0.65
APOBP04114 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
APOBP04114 AC097637.2-201ENST00000624096 1997 ntBASIC10.98□□□□□ -0.65
APOBP04114 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.98□□□□□ -0.65
APOBP04114 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.98□□□□□ -0.65
APOBP04114 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.98□□□□□ -0.65
APOBP04114 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOBP04114 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
APOBP04114 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.97□□□□□ -0.65
APOBP04114 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.97□□□□□ -0.65
APOBP04114 KLF2P3-201ENST00000451977 1087 ntBASIC10.97□□□□□ -0.65
APOBP04114 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
APOBP04114 AC004890.2-204ENST00000481968 304 ntBASIC10.97□□□□□ -0.65
APOBP04114 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.97□□□□□ -0.65
APOBP04114 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOBP04114 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms