Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC189A1A4V9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC189A1A4V9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC189A1A4V9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC189A1A4V9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 AL390955.1-201ENST00000428694 934 ntBASIC17.86■□□□□ 0.45
CCDC189A1A4V9 SNORA78-201ENST00000459373 127 ntBASIC17.86■□□□□ 0.45
CCDC189A1A4V9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 NAPSB-206ENST00000562112 1266 ntBASIC17.86■□□□□ 0.45
CCDC189A1A4V9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC189A1A4V9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 HMGA1P5-201ENST00000412453 271 ntBASIC17.85■□□□□ 0.45
CCDC189A1A4V9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 SEC1P-202ENST00000473944 940 ntBASIC17.85■□□□□ 0.45
CCDC189A1A4V9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 AC092865.7-201ENST00000641832 219 ntBASIC17.85■□□□□ 0.45
CCDC189A1A4V9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC189A1A4V9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC189A1A4V9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms