Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
HCFC2Q9Y5Z7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HCFC2Q9Y5Z7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
HCFC2Q9Y5Z7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
HCFC2Q9Y5Z7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.08■■□□□ 1.77
HCFC2Q9Y5Z7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
HCFC2Q9Y5Z7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.08■■□□□ 1.77
HCFC2Q9Y5Z7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HCFC2Q9Y5Z7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
HCFC2Q9Y5Z7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
HCFC2Q9Y5Z7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.07■■□□□ 1.76
HCFC2Q9Y5Z7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 THA1P-201ENST00000590384 1145 ntBASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HCFC2Q9Y5Z7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 AC103724.3-201ENST00000564481 992 ntBASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
HCFC2Q9Y5Z7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.04■■□□□ 1.76
HCFC2Q9Y5Z7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
HCFC2Q9Y5Z7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HCFC2Q9Y5Z7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
HCFC2Q9Y5Z7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HCFC2Q9Y5Z7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.03■■□□□ 1.76
HCFC2Q9Y5Z7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.03■■□□□ 1.76
HCFC2Q9Y5Z7 AL031848.2-201ENST00000607670 837 ntBASIC26.03■■□□□ 1.76
HCFC2Q9Y5Z7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HCFC2Q9Y5Z7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
HCFC2Q9Y5Z7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HCFC2Q9Y5Z7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.01■■□□□ 1.75
HCFC2Q9Y5Z7 AC019069.1-201ENST00000610008 1333 ntBASIC26■■□□□ 1.75
HCFC2Q9Y5Z7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
HCFC2Q9Y5Z7 ABCB10P1-201ENST00000614297 2181 ntBASIC26■■□□□ 1.75
HCFC2Q9Y5Z7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26■■□□□ 1.75
HCFC2Q9Y5Z7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.99■■□□□ 1.75
HCFC2Q9Y5Z7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
HCFC2Q9Y5Z7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HCFC2Q9Y5Z7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HCFC2Q9Y5Z7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HCFC2Q9Y5Z7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.98■■□□□ 1.75
HCFC2Q9Y5Z7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
HCFC2Q9Y5Z7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HCFC2Q9Y5Z7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
HCFC2Q9Y5Z7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
HCFC2Q9Y5Z7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.95■■□□□ 1.74
HCFC2Q9Y5Z7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
HCFC2Q9Y5Z7 AC019171.1-201ENST00000601251 1056 ntBASIC25.94■■□□□ 1.74
HCFC2Q9Y5Z7 WHAMMP3-201ENST00000611636 1609 ntBASIC25.94■■□□□ 1.74
HCFC2Q9Y5Z7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
HCFC2Q9Y5Z7 AL356441.2-201ENST00000443009 864 ntBASIC25.93■■□□□ 1.74
HCFC2Q9Y5Z7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HCFC2Q9Y5Z7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HCFC2Q9Y5Z7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HCFC2Q9Y5Z7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.92■■□□□ 1.74
HCFC2Q9Y5Z7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.92■■□□□ 1.74
HCFC2Q9Y5Z7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HCFC2Q9Y5Z7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
HCFC2Q9Y5Z7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HCFC2Q9Y5Z7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HCFC2Q9Y5Z7 AC087393.1-201ENST00000582896 145 ntBASIC25.91■■□□□ 1.74
HCFC2Q9Y5Z7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HCFC2Q9Y5Z7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.91■■□□□ 1.74
HCFC2Q9Y5Z7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HCFC2Q9Y5Z7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
HCFC2Q9Y5Z7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.9■■□□□ 1.74
HCFC2Q9Y5Z7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms