Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.75■■□□□ 1.07
COPS3Q9UNS2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS3Q9UNS2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPS3Q9UNS2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS3Q9UNS2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COPS3Q9UNS2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS3Q9UNS2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COPS3Q9UNS2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS3Q9UNS2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS3Q9UNS2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.73■■□□□ 1.07
COPS3Q9UNS2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COPS3Q9UNS2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COPS3Q9UNS2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS3Q9UNS2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS3Q9UNS2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS3Q9UNS2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COPS3Q9UNS2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.72■■□□□ 1.07
COPS3Q9UNS2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COPS3Q9UNS2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COPS3Q9UNS2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COPS3Q9UNS2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.71■■□□□ 1.07
COPS3Q9UNS2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS3Q9UNS2 ERN1-208ENST00000606895 2068 ntBASIC21.71■■□□□ 1.07
COPS3Q9UNS2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COPS3Q9UNS2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
COPS3Q9UNS2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.7■■□□□ 1.06
COPS3Q9UNS2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPS3Q9UNS2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COPS3Q9UNS2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COPS3Q9UNS2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COPS3Q9UNS2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COPS3Q9UNS2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.68■■□□□ 1.06
COPS3Q9UNS2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COPS3Q9UNS2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COPS3Q9UNS2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COPS3Q9UNS2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COPS3Q9UNS2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.65■■□□□ 1.06
COPS3Q9UNS2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COPS3Q9UNS2 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.65■■□□□ 1.06
COPS3Q9UNS2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COPS3Q9UNS2 AC010501.1-201ENST00000606270 1962 ntBASIC21.65■■□□□ 1.06
COPS3Q9UNS2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
COPS3Q9UNS2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COPS3Q9UNS2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COPS3Q9UNS2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COPS3Q9UNS2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.64■■□□□ 1.06
COPS3Q9UNS2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COPS3Q9UNS2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.64■■□□□ 1.05
COPS3Q9UNS2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
COPS3Q9UNS2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS3Q9UNS2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COPS3Q9UNS2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
COPS3Q9UNS2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COPS3Q9UNS2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COPS3Q9UNS2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
COPS3Q9UNS2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.61■■□□□ 1.05
COPS3Q9UNS2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COPS3Q9UNS2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.61■■□□□ 1.05
COPS3Q9UNS2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS3Q9UNS2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COPS3Q9UNS2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS3Q9UNS2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS3Q9UNS2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COPS3Q9UNS2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.6■■□□□ 1.05
COPS3Q9UNS2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COPS3Q9UNS2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
COPS3Q9UNS2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
COPS3Q9UNS2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COPS3Q9UNS2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS3Q9UNS2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.59■■□□□ 1.05
COPS3Q9UNS2 LINC01971-201ENST00000617888 1048 ntBASIC21.58■■□□□ 1.05
COPS3Q9UNS2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COPS3Q9UNS2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms