Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.52■■□□□ 1.84
UBQLN1Q9UMX0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.52■■□□□ 1.84
UBQLN1Q9UMX0 AC133552.2-201ENST00000619106 1032 ntBASIC26.52■■□□□ 1.84
UBQLN1Q9UMX0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBQLN1Q9UMX0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 KRT18P60-201ENST00000312876 1297 ntBASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBQLN1Q9UMX0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
UBQLN1Q9UMX0 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.49■■□□□ 1.83
UBQLN1Q9UMX0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
UBQLN1Q9UMX0 AC012354.3-201ENST00000623734 483 ntBASIC26.49■■□□□ 1.83
UBQLN1Q9UMX0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
UBQLN1Q9UMX0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.49■■□□□ 1.83
UBQLN1Q9UMX0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
UBQLN1Q9UMX0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
UBQLN1Q9UMX0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
UBQLN1Q9UMX0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
UBQLN1Q9UMX0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
UBQLN1Q9UMX0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.47■■□□□ 1.83
UBQLN1Q9UMX0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
UBQLN1Q9UMX0 AL592293.1-201ENST00000502889 1188 ntBASIC26.47■■□□□ 1.83
UBQLN1Q9UMX0 RAP2CP1-202ENST00000605179 643 ntBASIC26.47■■□□□ 1.83
UBQLN1Q9UMX0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.47■■□□□ 1.83
UBQLN1Q9UMX0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
UBQLN1Q9UMX0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
UBQLN1Q9UMX0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
UBQLN1Q9UMX0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
UBQLN1Q9UMX0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.46■■□□□ 1.83
UBQLN1Q9UMX0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
UBQLN1Q9UMX0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
UBQLN1Q9UMX0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
UBQLN1Q9UMX0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
UBQLN1Q9UMX0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
UBQLN1Q9UMX0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.45■■□□□ 1.82
UBQLN1Q9UMX0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
UBQLN1Q9UMX0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.44■■□□□ 1.82
UBQLN1Q9UMX0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.44■■□□□ 1.82
UBQLN1Q9UMX0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
UBQLN1Q9UMX0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
UBQLN1Q9UMX0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
UBQLN1Q9UMX0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
UBQLN1Q9UMX0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
UBQLN1Q9UMX0 AC142472.1-201ENST00000612013 1741 ntBASIC26.42■■□□□ 1.82
UBQLN1Q9UMX0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
UBQLN1Q9UMX0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
UBQLN1Q9UMX0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
UBQLN1Q9UMX0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.41■■□□□ 1.82
UBQLN1Q9UMX0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
UBQLN1Q9UMX0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
UBQLN1Q9UMX0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
UBQLN1Q9UMX0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
UBQLN1Q9UMX0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
UBQLN1Q9UMX0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
UBQLN1Q9UMX0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
UBQLN1Q9UMX0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
UBQLN1Q9UMX0 AC129492.7-201ENST00000622992 756 ntBASIC26.39■■□□□ 1.82
UBQLN1Q9UMX0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
UBQLN1Q9UMX0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
UBQLN1Q9UMX0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
UBQLN1Q9UMX0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
UBQLN1Q9UMX0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
UBQLN1Q9UMX0 AP004609.3-201ENST00000610705 1884 ntBASIC26.37■■□□□ 1.81
UBQLN1Q9UMX0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
UBQLN1Q9UMX0 AC004987.1-201ENST00000428627 508 ntBASIC26.37■■□□□ 1.81
UBQLN1Q9UMX0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 ATP5G2P3-201ENST00000429083 425 ntBASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
UBQLN1Q9UMX0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UBQLN1Q9UMX0 TSPY13P-201ENST00000338964 914 ntBASIC26.34■■□□□ 1.81
UBQLN1Q9UMX0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBQLN1Q9UMX0 AL033527.3-201ENST00000566366 1196 ntBASIC26.34■■□□□ 1.81
UBQLN1Q9UMX0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
UBQLN1Q9UMX0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBQLN1Q9UMX0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UBQLN1Q9UMX0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
UBQLN1Q9UMX0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
UBQLN1Q9UMX0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.33■■□□□ 1.81
UBQLN1Q9UMX0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
UBQLN1Q9UMX0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UBQLN1Q9UMX0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
UBQLN1Q9UMX0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
UBQLN1Q9UMX0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UBQLN1Q9UMX0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UBQLN1Q9UMX0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms