Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NEUROD4Q9HD90 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NEUROD4Q9HD90 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEUROD4Q9HD90 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NEUROD4Q9HD90 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NEUROD4Q9HD90 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NEUROD4Q9HD90 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 MIR639-201ENST00000384974 98 ntBASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
NEUROD4Q9HD90 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 DUSP8P4-201ENST00000399538 1761 ntBASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NEUROD4Q9HD90 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.08■■□□□ 1.29
NEUROD4Q9HD90 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NEUROD4Q9HD90 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.08■■□□□ 1.29
NEUROD4Q9HD90 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NEUROD4Q9HD90 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NEUROD4Q9HD90 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
NEUROD4Q9HD90 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEUROD4Q9HD90 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEUROD4Q9HD90 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEUROD4Q9HD90 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NEUROD4Q9HD90 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NEUROD4Q9HD90 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
NEUROD4Q9HD90 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NEUROD4Q9HD90 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
NEUROD4Q9HD90 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.06■■□□□ 1.28
NEUROD4Q9HD90 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NEUROD4Q9HD90 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEUROD4Q9HD90 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEUROD4Q9HD90 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
NEUROD4Q9HD90 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEUROD4Q9HD90 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEUROD4Q9HD90 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
NEUROD4Q9HD90 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.04■■□□□ 1.28
NEUROD4Q9HD90 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NEUROD4Q9HD90 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
NEUROD4Q9HD90 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NEUROD4Q9HD90 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 MIR3648-2-201ENST00000581792 180 ntBASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 MIR3648-1-201ENST00000615959 180 ntBASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEUROD4Q9HD90 AL359258.2-201ENST00000564063 1566 ntBASIC23.02■■□□□ 1.28
NEUROD4Q9HD90 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.02■■□□□ 1.28
NEUROD4Q9HD90 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEUROD4Q9HD90 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.02■■□□□ 1.28
NEUROD4Q9HD90 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.01■■□□□ 1.27
NEUROD4Q9HD90 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NEUROD4Q9HD90 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEUROD4Q9HD90 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEUROD4Q9HD90 AC126177.7-201ENST00000547904 679 ntBASIC23■■□□□ 1.27
NEUROD4Q9HD90 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEUROD4Q9HD90 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23■■□□□ 1.27
NEUROD4Q9HD90 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NEUROD4Q9HD90 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NEUROD4Q9HD90 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.99■■□□□ 1.27
NEUROD4Q9HD90 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.99■■□□□ 1.27
NEUROD4Q9HD90 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NEUROD4Q9HD90 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.98■■□□□ 1.27
NEUROD4Q9HD90 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.97■■□□□ 1.27
NEUROD4Q9HD90 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEUROD4Q9HD90 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEUROD4Q9HD90 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
NEUROD4Q9HD90 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEUROD4Q9HD90 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
NEUROD4Q9HD90 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEUROD4Q9HD90 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NEUROD4Q9HD90 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
NEUROD4Q9HD90 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NEUROD4Q9HD90 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NEUROD4Q9HD90 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NEUROD4Q9HD90 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEUROD4Q9HD90 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NEUROD4Q9HD90 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 1561.7 ms