Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZNF408Q9H9D4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
ZNF408Q9H9D4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.41■■■□□ 2.3
ZNF408Q9H9D4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.41■■■□□ 2.3
ZNF408Q9H9D4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ZNF408Q9H9D4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZNF408Q9H9D4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZNF408Q9H9D4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
ZNF408Q9H9D4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.39■■■□□ 2.3
ZNF408Q9H9D4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.39■■■□□ 2.3
ZNF408Q9H9D4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.39■■■□□ 2.3
ZNF408Q9H9D4 Z92544.1-202ENST00000571933 1220 ntBASIC29.39■■■□□ 2.3
ZNF408Q9H9D4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.39■■■□□ 2.3
ZNF408Q9H9D4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ZNF408Q9H9D4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
ZNF408Q9H9D4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
ZNF408Q9H9D4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
ZNF408Q9H9D4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.38■■■□□ 2.29
ZNF408Q9H9D4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZNF408Q9H9D4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZNF408Q9H9D4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
ZNF408Q9H9D4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.37■■■□□ 2.29
ZNF408Q9H9D4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZNF408Q9H9D4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZNF408Q9H9D4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZNF408Q9H9D4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.36■■■□□ 2.29
ZNF408Q9H9D4 AP004833.2-201ENST00000532228 1454 ntBASIC29.36■■■□□ 2.29
ZNF408Q9H9D4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ZNF408Q9H9D4 MIR638-201ENST00000385237 100 ntBASIC29.35■■■□□ 2.29
ZNF408Q9H9D4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.34■■■□□ 2.29
ZNF408Q9H9D4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.34■■■□□ 2.29
ZNF408Q9H9D4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.34■■■□□ 2.29
ZNF408Q9H9D4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZNF408Q9H9D4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZNF408Q9H9D4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZNF408Q9H9D4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.32■■■□□ 2.28
ZNF408Q9H9D4 KRT125P-201ENST00000546827 989 ntBASIC29.32■■■□□ 2.28
ZNF408Q9H9D4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZNF408Q9H9D4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.32■■■□□ 2.28
ZNF408Q9H9D4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZNF408Q9H9D4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZNF408Q9H9D4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ZNF408Q9H9D4 AC019171.1-201ENST00000601251 1056 ntBASIC29.31■■■□□ 2.28
ZNF408Q9H9D4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZNF408Q9H9D4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ZNF408Q9H9D4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZNF408Q9H9D4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ZNF408Q9H9D4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ZNF408Q9H9D4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
ZNF408Q9H9D4 MIR4787-201ENST00000607364 84 ntBASIC29.29■■■□□ 2.28
ZNF408Q9H9D4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ZNF408Q9H9D4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
ZNF408Q9H9D4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.28■■■□□ 2.28
ZNF408Q9H9D4 AL359504.2-201ENST00000605506 1601 ntBASIC29.27■■■□□ 2.28
ZNF408Q9H9D4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
ZNF408Q9H9D4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.27■■■□□ 2.28
ZNF408Q9H9D4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.27■■■□□ 2.28
ZNF408Q9H9D4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.27■■■□□ 2.28
ZNF408Q9H9D4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.26■■■□□ 2.28
ZNF408Q9H9D4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.26■■■□□ 2.28
ZNF408Q9H9D4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ZNF408Q9H9D4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
ZNF408Q9H9D4 KRT16P3-201ENST00000439127 1283 ntBASIC29.26■■■□□ 2.27
ZNF408Q9H9D4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.26■■■□□ 2.27
ZNF408Q9H9D4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
ZNF408Q9H9D4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 UNC93B8-201ENST00000511903 705 ntBASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 AC087393.1-201ENST00000582896 145 ntBASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.25■■■□□ 2.27
ZNF408Q9H9D4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ZNF408Q9H9D4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ZNF408Q9H9D4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ZNF408Q9H9D4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.23■■■□□ 2.27
ZNF408Q9H9D4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ZNF408Q9H9D4 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.23■■■□□ 2.27
ZNF408Q9H9D4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 BX664725.1-201ENST00000438252 379 ntBASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 LONRF2P2-201ENST00000439212 571 ntBASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
ZNF408Q9H9D4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ZNF408Q9H9D4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
ZNF408Q9H9D4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.21■■■□□ 2.27
ZNF408Q9H9D4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
ZNF408Q9H9D4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.2■■■□□ 2.26
ZNF408Q9H9D4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.2■■■□□ 2.26
ZNF408Q9H9D4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ZNF408Q9H9D4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
ZNF408Q9H9D4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.19■■■□□ 2.26
ZNF408Q9H9D4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.19■■■□□ 2.26
ZNF408Q9H9D4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.19■■■□□ 2.26
ZNF408Q9H9D4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ZNF408Q9H9D4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.19■■■□□ 2.26
ZNF408Q9H9D4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms