Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC40Q9H9A6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
LRRC40Q9H9A6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRRC40Q9H9A6 AC145676.1-201ENST00000514988 2004 ntBASIC24.9■■□□□ 1.58
LRRC40Q9H9A6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRC40Q9H9A6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRC40Q9H9A6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
LRRC40Q9H9A6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRRC40Q9H9A6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LRRC40Q9H9A6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC40Q9H9A6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC40Q9H9A6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
LRRC40Q9H9A6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRRC40Q9H9A6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 AC092803.2-201ENST00000564287 1899 ntBASIC24.87■■□□□ 1.57
LRRC40Q9H9A6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC40Q9H9A6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC40Q9H9A6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC40Q9H9A6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRC40Q9H9A6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 AC126177.7-201ENST00000547904 679 ntBASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRRC40Q9H9A6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LRRC40Q9H9A6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.84■■□□□ 1.57
LRRC40Q9H9A6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
LRRC40Q9H9A6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.83■■□□□ 1.57
LRRC40Q9H9A6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.83■■□□□ 1.57
LRRC40Q9H9A6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
LRRC40Q9H9A6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRRC40Q9H9A6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC40Q9H9A6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC40Q9H9A6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.82■■□□□ 1.56
LRRC40Q9H9A6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRRC40Q9H9A6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
LRRC40Q9H9A6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.81■■□□□ 1.56
LRRC40Q9H9A6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.81■■□□□ 1.56
LRRC40Q9H9A6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LRRC40Q9H9A6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRRC40Q9H9A6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRRC40Q9H9A6 DUSP8P4-201ENST00000399538 1761 ntBASIC24.8■■□□□ 1.56
LRRC40Q9H9A6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC40Q9H9A6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC40Q9H9A6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC40Q9H9A6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRC40Q9H9A6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 AL359504.2-201ENST00000605506 1601 ntBASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.78■■□□□ 1.56
LRRC40Q9H9A6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LRRC40Q9H9A6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
LRRC40Q9H9A6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.77■■□□□ 1.56
LRRC40Q9H9A6 MIR639-201ENST00000384974 98 ntBASIC24.77■■□□□ 1.56
LRRC40Q9H9A6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
LRRC40Q9H9A6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC40Q9H9A6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
LRRC40Q9H9A6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.76■■□□□ 1.55
LRRC40Q9H9A6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC40Q9H9A6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRC40Q9H9A6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
LRRC40Q9H9A6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LRRC40Q9H9A6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC40Q9H9A6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC40Q9H9A6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC40Q9H9A6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC40Q9H9A6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC40Q9H9A6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRC40Q9H9A6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms