Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCGF1Q9BSM1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.42■□□□□ 0.86
PCGF1Q9BSM1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCGF1Q9BSM1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCGF1Q9BSM1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.41■□□□□ 0.86
PCGF1Q9BSM1 ECEL1P2-201ENST00000461596 1295 ntBASIC20.41■□□□□ 0.86
PCGF1Q9BSM1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCGF1Q9BSM1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCGF1Q9BSM1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCGF1Q9BSM1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCGF1Q9BSM1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCGF1Q9BSM1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PCGF1Q9BSM1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCGF1Q9BSM1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCGF1Q9BSM1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCGF1Q9BSM1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCGF1Q9BSM1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCGF1Q9BSM1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCGF1Q9BSM1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCGF1Q9BSM1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 AL157400.5-201ENST00000507624 621 ntBASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCGF1Q9BSM1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCGF1Q9BSM1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.37■□□□□ 0.85
PCGF1Q9BSM1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCGF1Q9BSM1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PCGF1Q9BSM1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCGF1Q9BSM1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCGF1Q9BSM1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCGF1Q9BSM1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCGF1Q9BSM1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.36■□□□□ 0.85
PCGF1Q9BSM1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.36■□□□□ 0.85
PCGF1Q9BSM1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCGF1Q9BSM1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.35■□□□□ 0.85
PCGF1Q9BSM1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.35■□□□□ 0.85
PCGF1Q9BSM1 NTF6A-201ENST00000591175 560 ntBASIC20.35■□□□□ 0.85
PCGF1Q9BSM1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCGF1Q9BSM1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCGF1Q9BSM1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.34■□□□□ 0.85
PCGF1Q9BSM1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.34■□□□□ 0.85
PCGF1Q9BSM1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCGF1Q9BSM1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.34■□□□□ 0.85
PCGF1Q9BSM1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCGF1Q9BSM1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.33■□□□□ 0.85
PCGF1Q9BSM1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.33■□□□□ 0.85
PCGF1Q9BSM1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCGF1Q9BSM1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCGF1Q9BSM1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCGF1Q9BSM1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCGF1Q9BSM1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.32■□□□□ 0.84
PCGF1Q9BSM1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.32■□□□□ 0.84
PCGF1Q9BSM1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCGF1Q9BSM1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 SMPD5-203ENST00000639008 1464 ntBASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCGF1Q9BSM1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCGF1Q9BSM1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCGF1Q9BSM1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCGF1Q9BSM1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCGF1Q9BSM1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCGF1Q9BSM1 WHAMMP3-201ENST00000611636 1609 ntBASIC20.3■□□□□ 0.84
PCGF1Q9BSM1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCGF1Q9BSM1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCGF1Q9BSM1 U85056.1-201ENST00000616429 682 ntBASIC20.29■□□□□ 0.84
PCGF1Q9BSM1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCGF1Q9BSM1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCGF1Q9BSM1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.28■□□□□ 0.84
PCGF1Q9BSM1 AC007029.1-201ENST00000604183 313 ntBASIC20.28■□□□□ 0.84
PCGF1Q9BSM1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCGF1Q9BSM1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCGF1Q9BSM1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCGF1Q9BSM1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PCGF1Q9BSM1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.27■□□□□ 0.83
PCGF1Q9BSM1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCGF1Q9BSM1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCGF1Q9BSM1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 537.3 ms