Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.91
LRCH3Q96II8 AC104564.3-201ENST00000582367 638 ntBASIC27.01■■□□□ 1.91
LRCH3Q96II8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRCH3Q96II8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRCH3Q96II8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27■■□□□ 1.91
LRCH3Q96II8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
LRCH3Q96II8 AC131281.2-201ENST00000520478 145 ntBASIC27■■□□□ 1.91
LRCH3Q96II8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27■■□□□ 1.91
LRCH3Q96II8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRCH3Q96II8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRCH3Q96II8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
LRCH3Q96II8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRCH3Q96II8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRCH3Q96II8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
LRCH3Q96II8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
LRCH3Q96II8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRCH3Q96II8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRCH3Q96II8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
LRCH3Q96II8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.98■■□□□ 1.91
LRCH3Q96II8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRCH3Q96II8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.98■■□□□ 1.91
LRCH3Q96II8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
LRCH3Q96II8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.97■■□□□ 1.91
LRCH3Q96II8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
LRCH3Q96II8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
LRCH3Q96II8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
LRCH3Q96II8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
LRCH3Q96II8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
LRCH3Q96II8 AL136116.3-201ENST00000402907 1138 ntBASIC26.95■■□□□ 1.9
LRCH3Q96II8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.95■■□□□ 1.9
LRCH3Q96II8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRCH3Q96II8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRCH3Q96II8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRCH3Q96II8 ZNRF2P3-201ENST00000424200 374 ntBASIC26.94■■□□□ 1.9
LRCH3Q96II8 AC026271.2-201ENST00000428091 497 ntBASIC26.94■■□□□ 1.9
LRCH3Q96II8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.94■■□□□ 1.9
LRCH3Q96II8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.94■■□□□ 1.9
LRCH3Q96II8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRCH3Q96II8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LRCH3Q96II8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.93■■□□□ 1.9
LRCH3Q96II8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.93■■□□□ 1.9
LRCH3Q96II8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.93■■□□□ 1.9
LRCH3Q96II8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
LRCH3Q96II8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
LRCH3Q96II8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
LRCH3Q96II8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.93■■□□□ 1.9
LRCH3Q96II8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRCH3Q96II8 MIR3960-201ENST00000583311 91 ntBASIC26.92■■□□□ 1.9
LRCH3Q96II8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.92■■□□□ 1.9
LRCH3Q96II8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRCH3Q96II8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LRCH3Q96II8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
LRCH3Q96II8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
LRCH3Q96II8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.91■■□□□ 1.9
LRCH3Q96II8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.9■■□□□ 1.9
LRCH3Q96II8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
LRCH3Q96II8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.9■■□□□ 1.9
LRCH3Q96II8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.9■■□□□ 1.9
LRCH3Q96II8 AC019171.1-201ENST00000601251 1056 ntBASIC26.9■■□□□ 1.9
LRCH3Q96II8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LRCH3Q96II8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
LRCH3Q96II8 BX664725.1-201ENST00000438252 379 ntBASIC26.89■■□□□ 1.9
LRCH3Q96II8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.89■■□□□ 1.9
LRCH3Q96II8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
LRCH3Q96II8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
LRCH3Q96II8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.88■■□□□ 1.89
LRCH3Q96II8 AC096631.2-201ENST00000436136 790 ntBASIC26.88■■□□□ 1.89
LRCH3Q96II8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.88■■□□□ 1.89
LRCH3Q96II8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.88■■□□□ 1.89
LRCH3Q96II8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LRCH3Q96II8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LRCH3Q96II8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.87■■□□□ 1.89
LRCH3Q96II8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LRCH3Q96II8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.87■■□□□ 1.89
LRCH3Q96II8 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.87■■□□□ 1.89
LRCH3Q96II8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.87■■□□□ 1.89
LRCH3Q96II8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LRCH3Q96II8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.86■■□□□ 1.89
LRCH3Q96II8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LRCH3Q96II8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
LRCH3Q96II8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LRCH3Q96II8 TSPY9P-201ENST00000440215 945 ntBASIC26.85■■□□□ 1.89
LRCH3Q96II8 TSPY11P-201ENST00000442607 1045 ntBASIC26.85■■□□□ 1.89
LRCH3Q96II8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.85■■□□□ 1.89
LRCH3Q96II8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.85■■□□□ 1.89
LRCH3Q96II8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.85■■□□□ 1.89
LRCH3Q96II8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRCH3Q96II8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
LRCH3Q96II8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.84■■□□□ 1.89
LRCH3Q96II8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LRCH3Q96II8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.83■■□□□ 1.89
LRCH3Q96II8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.83■■□□□ 1.89
LRCH3Q96II8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LRCH3Q96II8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
LRCH3Q96II8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.83■■□□□ 1.89
LRCH3Q96II8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
LRCH3Q96II8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
LRCH3Q96II8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.83■■□□□ 1.88
LRCH3Q96II8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LRCH3Q96II8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms