Protein–RNA interactions for Protein: Q96BA8

CREB3L1, Cyclic AMP-responsive element-binding protein 3-like protein 1, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1Q96BA8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CREB3L1Q96BA8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CREB3L1Q96BA8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CREB3L1Q96BA8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.28■■□□□ 1
CREB3L1Q96BA8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CREB3L1Q96BA8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CREB3L1Q96BA8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CREB3L1Q96BA8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CREB3L1Q96BA8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CREB3L1Q96BA8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
CREB3L1Q96BA8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 AC127502.1-201ENST00000399971 1502 ntBASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 AC100797.4-201ENST00000631653 1827 ntBASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CREB3L1Q96BA8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 RPS2P35-201ENST00000443417 897 ntBASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CREB3L1Q96BA8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CREB3L1Q96BA8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.22■□□□□ 0.99
CREB3L1Q96BA8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CREB3L1Q96BA8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CREB3L1Q96BA8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CREB3L1Q96BA8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CREB3L1Q96BA8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CREB3L1Q96BA8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CREB3L1Q96BA8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CREB3L1Q96BA8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CREB3L1Q96BA8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.19■□□□□ 0.98
CREB3L1Q96BA8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.19■□□□□ 0.98
CREB3L1Q96BA8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CREB3L1Q96BA8 LINC00543-201ENST00000567234 1845 ntBASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 AC142381.3-201ENST00000568208 1670 ntBASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.18■□□□□ 0.98
CREB3L1Q96BA8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CREB3L1Q96BA8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.16■□□□□ 0.98
CREB3L1Q96BA8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 AC018358.1-201ENST00000631079 1402 ntBASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 MIR6090-201ENST00000622481 60 ntBASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CREB3L1Q96BA8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CREB3L1Q96BA8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.14■□□□□ 0.98
CREB3L1Q96BA8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CREB3L1Q96BA8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CREB3L1Q96BA8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CREB3L1Q96BA8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms