Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
SMARCC1Q92922 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SMARCC1Q92922 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SMARCC1Q92922 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC32■■■□□ 2.71
SMARCC1Q92922 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.99■■■□□ 2.71
SMARCC1Q92922 ABCB10P3-201ENST00000561950 2166 ntBASIC31.99■■■□□ 2.71
SMARCC1Q92922 AL359504.2-201ENST00000605506 1601 ntBASIC31.99■■■□□ 2.71
SMARCC1Q92922 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
SMARCC1Q92922 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
SMARCC1Q92922 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCC1Q92922 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.98■■■□□ 2.71
SMARCC1Q92922 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCC1Q92922 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMARCC1Q92922 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
SMARCC1Q92922 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SMARCC1Q92922 AC019171.1-201ENST00000601251 1056 ntBASIC31.97■■■□□ 2.71
SMARCC1Q92922 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
SMARCC1Q92922 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMARCC1Q92922 AL139393.2-201ENST00000608721 2025 ntBASIC31.96■■■□□ 2.71
SMARCC1Q92922 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
SMARCC1Q92922 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCC1Q92922 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
SMARCC1Q92922 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCC1Q92922 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.94■■■□□ 2.7
SMARCC1Q92922 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCC1Q92922 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCC1Q92922 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCC1Q92922 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCC1Q92922 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCC1Q92922 AL356441.2-201ENST00000443009 864 ntBASIC31.93■■■□□ 2.7
SMARCC1Q92922 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
SMARCC1Q92922 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCC1Q92922 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SMARCC1Q92922 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.92■■■□□ 2.7
SMARCC1Q92922 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.92■■■□□ 2.7
SMARCC1Q92922 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
SMARCC1Q92922 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.91■■■□□ 2.7
SMARCC1Q92922 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.91■■■□□ 2.7
SMARCC1Q92922 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SMARCC1Q92922 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.89■■■□□ 2.7
SMARCC1Q92922 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
SMARCC1Q92922 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCC1Q92922 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCC1Q92922 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMARCC1Q92922 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMARCC1Q92922 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.87■■■□□ 2.69
SMARCC1Q92922 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMARCC1Q92922 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.87■■■□□ 2.69
SMARCC1Q92922 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
SMARCC1Q92922 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SMARCC1Q92922 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCC1Q92922 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCC1Q92922 AC087393.1-201ENST00000582896 145 ntBASIC31.86■■■□□ 2.69
SMARCC1Q92922 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCC1Q92922 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCC1Q92922 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCC1Q92922 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.85■■■□□ 2.69
SMARCC1Q92922 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
SMARCC1Q92922 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCC1Q92922 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCC1Q92922 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCC1Q92922 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.84■■■□□ 2.69
SMARCC1Q92922 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.84■■■□□ 2.69
SMARCC1Q92922 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCC1Q92922 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCC1Q92922 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCC1Q92922 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCC1Q92922 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.83■■■□□ 2.69
SMARCC1Q92922 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMARCC1Q92922 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
SMARCC1Q92922 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.82■■■□□ 2.68
SMARCC1Q92922 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.82■■■□□ 2.68
SMARCC1Q92922 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCC1Q92922 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.82■■■□□ 2.68
SMARCC1Q92922 AC239859.2-201ENST00000444165 318 ntBASIC31.82■■■□□ 2.68
SMARCC1Q92922 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCC1Q92922 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCC1Q92922 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCC1Q92922 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.81■■■□□ 2.68
SMARCC1Q92922 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCC1Q92922 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCC1Q92922 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCC1Q92922 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
SMARCC1Q92922 Z92544.1-202ENST00000571933 1220 ntBASIC31.8■■■□□ 2.68
SMARCC1Q92922 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCC1Q92922 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCC1Q92922 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCC1Q92922 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.79■■■□□ 2.68
SMARCC1Q92922 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.79■■■□□ 2.68
SMARCC1Q92922 WHAMMP3-201ENST00000611636 1609 ntBASIC31.78■■■□□ 2.68
SMARCC1Q92922 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
SMARCC1Q92922 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCC1Q92922 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCC1Q92922 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCC1Q92922 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCC1Q92922 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
SMARCC1Q92922 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
SMARCC1Q92922 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCC1Q92922 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCC1Q92922 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms