Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIML2Q8N7C3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.44■■□□□ 1.34
TRIML2Q8N7C3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIML2Q8N7C3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRIML2Q8N7C3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRIML2Q8N7C3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 AC145676.1-201ENST00000514988 2004 ntBASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.43■■□□□ 1.34
TRIML2Q8N7C3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIML2Q8N7C3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.42■■□□□ 1.34
TRIML2Q8N7C3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIML2Q8N7C3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIML2Q8N7C3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIML2Q8N7C3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRIML2Q8N7C3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
TRIML2Q8N7C3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.41■■□□□ 1.34
TRIML2Q8N7C3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TRIML2Q8N7C3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIML2Q8N7C3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRIML2Q8N7C3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIML2Q8N7C3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIML2Q8N7C3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIML2Q8N7C3 AP004609.3-201ENST00000610705 1884 ntBASIC23.39■■□□□ 1.34
TRIML2Q8N7C3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.39■■□□□ 1.33
TRIML2Q8N7C3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIML2Q8N7C3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIML2Q8N7C3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIML2Q8N7C3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIML2Q8N7C3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.38■■□□□ 1.33
TRIML2Q8N7C3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIML2Q8N7C3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIML2Q8N7C3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIML2Q8N7C3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TRIML2Q8N7C3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIML2Q8N7C3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIML2Q8N7C3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIML2Q8N7C3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TRIML2Q8N7C3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIML2Q8N7C3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIML2Q8N7C3 WHAMMP3-201ENST00000611636 1609 ntBASIC23.34■■□□□ 1.33
TRIML2Q8N7C3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TRIML2Q8N7C3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
TRIML2Q8N7C3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIML2Q8N7C3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TRIML2Q8N7C3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIML2Q8N7C3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIML2Q8N7C3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.33■■□□□ 1.33
TRIML2Q8N7C3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRIML2Q8N7C3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRIML2Q8N7C3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
TRIML2Q8N7C3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML2Q8N7C3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML2Q8N7C3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML2Q8N7C3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML2Q8N7C3 AC142472.1-201ENST00000612013 1741 ntBASIC23.3■■□□□ 1.32
TRIML2Q8N7C3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML2Q8N7C3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML2Q8N7C3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIML2Q8N7C3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIML2Q8N7C3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIML2Q8N7C3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIML2Q8N7C3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIML2Q8N7C3 LINC01971-201ENST00000617888 1048 ntBASIC23.28■■□□□ 1.32
TRIML2Q8N7C3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML2Q8N7C3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML2Q8N7C3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIML2Q8N7C3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML2Q8N7C3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML2Q8N7C3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIML2Q8N7C3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML2Q8N7C3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML2Q8N7C3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIML2Q8N7C3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.26■■□□□ 1.31
TRIML2Q8N7C3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.26■■□□□ 1.31
TRIML2Q8N7C3 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms