Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRAM1L1Q8N609 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRAM1L1Q8N609 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.39■■□□□ 1.49
TRAM1L1Q8N609 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRAM1L1Q8N609 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRAM1L1Q8N609 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
TRAM1L1Q8N609 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRAM1L1Q8N609 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.38■■□□□ 1.49
TRAM1L1Q8N609 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.38■■□□□ 1.49
TRAM1L1Q8N609 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRAM1L1Q8N609 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
TRAM1L1Q8N609 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRAM1L1Q8N609 AC007029.1-201ENST00000604183 313 ntBASIC24.37■■□□□ 1.49
TRAM1L1Q8N609 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRAM1L1Q8N609 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRAM1L1Q8N609 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
TRAM1L1Q8N609 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRAM1L1Q8N609 MIR3960-201ENST00000583311 91 ntBASIC24.36■■□□□ 1.49
TRAM1L1Q8N609 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRAM1L1Q8N609 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRAM1L1Q8N609 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.35■■□□□ 1.49
TRAM1L1Q8N609 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRAM1L1Q8N609 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRAM1L1Q8N609 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TRAM1L1Q8N609 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 AL121749.1-202ENST00000609313 2153 ntBASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.33■■□□□ 1.49
TRAM1L1Q8N609 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRAM1L1Q8N609 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
TRAM1L1Q8N609 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRAM1L1Q8N609 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.32■■□□□ 1.48
TRAM1L1Q8N609 RP9P-202ENST00000450133 1212 ntBASIC24.32■■□□□ 1.48
TRAM1L1Q8N609 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TRAM1L1Q8N609 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRAM1L1Q8N609 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
TRAM1L1Q8N609 ABHD17AP5-201ENST00000580133 923 ntBASIC24.31■■□□□ 1.48
TRAM1L1Q8N609 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TRAM1L1Q8N609 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRAM1L1Q8N609 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRAM1L1Q8N609 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TRAM1L1Q8N609 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRAM1L1Q8N609 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRAM1L1Q8N609 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.29■■□□□ 1.48
TRAM1L1Q8N609 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.29■■□□□ 1.48
TRAM1L1Q8N609 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.29■■□□□ 1.48
TRAM1L1Q8N609 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRAM1L1Q8N609 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRAM1L1Q8N609 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
TRAM1L1Q8N609 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRAM1L1Q8N609 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRAM1L1Q8N609 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.27■■□□□ 1.48
TRAM1L1Q8N609 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRAM1L1Q8N609 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAM1L1Q8N609 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAM1L1Q8N609 AC093536.1-201ENST00000569153 554 ntBASIC24.26■■□□□ 1.47
TRAM1L1Q8N609 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
TRAM1L1Q8N609 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRAM1L1Q8N609 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRAM1L1Q8N609 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRAM1L1Q8N609 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.24■■□□□ 1.47
TRAM1L1Q8N609 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.24■■□□□ 1.47
TRAM1L1Q8N609 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.24■■□□□ 1.47
TRAM1L1Q8N609 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRAM1L1Q8N609 AC026202.3-201ENST00000600805 1127 ntBASIC24.23■■□□□ 1.47
TRAM1L1Q8N609 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRAM1L1Q8N609 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRAM1L1Q8N609 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.23■■□□□ 1.47
TRAM1L1Q8N609 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms