Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC025884.2-201ENST00000553429 711 ntBASIC26.21■■□□□ 1.79
TTC39CQ8N584 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.21■■□□□ 1.79
TTC39CQ8N584 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TTC39CQ8N584 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
TTC39CQ8N584 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
TTC39CQ8N584 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.2■■□□□ 1.79
TTC39CQ8N584 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TTC39CQ8N584 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.2■■□□□ 1.78
TTC39CQ8N584 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.2■■□□□ 1.78
TTC39CQ8N584 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
TTC39CQ8N584 SMPD5-203ENST00000639008 1464 ntBASIC26.19■■□□□ 1.78
TTC39CQ8N584 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.19■■□□□ 1.78
TTC39CQ8N584 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TTC39CQ8N584 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39CQ8N584 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
TTC39CQ8N584 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.18■■□□□ 1.78
TTC39CQ8N584 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC39CQ8N584 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
TTC39CQ8N584 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC39CQ8N584 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39CQ8N584 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39CQ8N584 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.17■■□□□ 1.78
TTC39CQ8N584 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TTC39CQ8N584 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.16■■□□□ 1.78
TTC39CQ8N584 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC39CQ8N584 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39CQ8N584 MIR3960-201ENST00000583311 91 ntBASIC26.15■■□□□ 1.78
TTC39CQ8N584 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39CQ8N584 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39CQ8N584 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39CQ8N584 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39CQ8N584 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39CQ8N584 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
TTC39CQ8N584 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39CQ8N584 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.14■■□□□ 1.77
TTC39CQ8N584 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TTC39CQ8N584 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TTC39CQ8N584 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.13■■□□□ 1.77
TTC39CQ8N584 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.13■■□□□ 1.77
TTC39CQ8N584 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC39CQ8N584 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39CQ8N584 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39CQ8N584 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39CQ8N584 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.12■■□□□ 1.77
TTC39CQ8N584 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39CQ8N584 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
TTC39CQ8N584 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
TTC39CQ8N584 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC39CQ8N584 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TTC39CQ8N584 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TTC39CQ8N584 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TTC39CQ8N584 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TTC39CQ8N584 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.1■■□□□ 1.77
TTC39CQ8N584 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TTC39CQ8N584 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.1■■□□□ 1.77
TTC39CQ8N584 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
TTC39CQ8N584 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TTC39CQ8N584 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
TTC39CQ8N584 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TTC39CQ8N584 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TTC39CQ8N584 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TTC39CQ8N584 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.09■■□□□ 1.77
TTC39CQ8N584 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC39CQ8N584 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC39CQ8N584 RARRES2P2-201ENST00000394842 485 ntBASIC26.09■■□□□ 1.77
TTC39CQ8N584 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TTC39CQ8N584 AC007029.1-201ENST00000604183 313 ntBASIC26.09■■□□□ 1.77
TTC39CQ8N584 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC39CQ8N584 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.09■■□□□ 1.77
TTC39CQ8N584 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TTC39CQ8N584 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TTC39CQ8N584 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TTC39CQ8N584 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.07■■□□□ 1.76
TTC39CQ8N584 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TTC39CQ8N584 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.07■■□□□ 1.76
TTC39CQ8N584 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC39CQ8N584 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 RP9P-202ENST00000450133 1212 ntBASIC26.06■■□□□ 1.76
TTC39CQ8N584 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.06■■□□□ 1.76
TTC39CQ8N584 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TTC39CQ8N584 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TTC39CQ8N584 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.05■■□□□ 1.76
TTC39CQ8N584 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.05■■□□□ 1.76
TTC39CQ8N584 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TTC39CQ8N584 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.05■■□□□ 1.76
TTC39CQ8N584 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TTC39CQ8N584 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.04■■□□□ 1.76
TTC39CQ8N584 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TTC39CQ8N584 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TTC39CQ8N584 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC39CQ8N584 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.03■■□□□ 1.76
TTC39CQ8N584 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.03■■□□□ 1.76
TTC39CQ8N584 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.03■■□□□ 1.76
TTC39CQ8N584 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TTC39CQ8N584 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms