Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC103834.1-201ENST00000520383 144 ntBASIC25.18■■□□□ 1.62
SYNPOQ8N3V7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYNPOQ8N3V7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
SYNPOQ8N3V7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SYNPOQ8N3V7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYNPOQ8N3V7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYNPOQ8N3V7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.17■■□□□ 1.62
SYNPOQ8N3V7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.17■■□□□ 1.62
SYNPOQ8N3V7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SYNPOQ8N3V7 AC139426.1-201ENST00000568218 2529 ntBASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 MIR4508-201ENST00000584178 70 ntBASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SYNPOQ8N3V7 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.15■■□□□ 1.62
SYNPOQ8N3V7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SYNPOQ8N3V7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SYNPOQ8N3V7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SYNPOQ8N3V7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYNPOQ8N3V7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SYNPOQ8N3V7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.14■■□□□ 1.61
SYNPOQ8N3V7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.13■■□□□ 1.61
SYNPOQ8N3V7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SYNPOQ8N3V7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.13■■□□□ 1.61
SYNPOQ8N3V7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYNPOQ8N3V7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.11■■□□□ 1.61
SYNPOQ8N3V7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYNPOQ8N3V7 AL592295.1-201ENST00000400984 884 ntBASIC25.11■■□□□ 1.61
SYNPOQ8N3V7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.11■■□□□ 1.61
SYNPOQ8N3V7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.11■■□□□ 1.61
SYNPOQ8N3V7 PVT1_1.1-201ENST00000615125 194 ntBASIC25.11■■□□□ 1.61
SYNPOQ8N3V7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SYNPOQ8N3V7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SYNPOQ8N3V7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SYNPOQ8N3V7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SYNPOQ8N3V7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SYNPOQ8N3V7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SYNPOQ8N3V7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SYNPOQ8N3V7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.08■■□□□ 1.61
SYNPOQ8N3V7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SYNPOQ8N3V7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SYNPOQ8N3V7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.07■■□□□ 1.6
SYNPOQ8N3V7 AL139393.2-201ENST00000608721 2025 ntBASIC25.07■■□□□ 1.6
SYNPOQ8N3V7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SYNPOQ8N3V7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SYNPOQ8N3V7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SYNPOQ8N3V7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SYNPOQ8N3V7 GUSBP5-201ENST00000418136 578 ntBASIC25.06■■□□□ 1.6
SYNPOQ8N3V7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SYNPOQ8N3V7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 AC019171.1-201ENST00000601251 1056 ntBASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 AL359504.2-201ENST00000605506 1601 ntBASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SYNPOQ8N3V7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYNPOQ8N3V7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SYNPOQ8N3V7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYNPOQ8N3V7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SYNPOQ8N3V7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
SYNPOQ8N3V7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SYNPOQ8N3V7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.02■■□□□ 1.6
SYNPOQ8N3V7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.02■■□□□ 1.6
SYNPOQ8N3V7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 AL031848.2-201ENST00000607670 837 ntBASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 AC131212.1-201ENST00000613771 668 ntBASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
SYNPOQ8N3V7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
SYNPOQ8N3V7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SYNPOQ8N3V7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SYNPOQ8N3V7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SYNPOQ8N3V7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25■■□□□ 1.59
SYNPOQ8N3V7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms