Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LAPTM4BQ86VI4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LAPTM4BQ86VI4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LAPTM4BQ86VI4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LAPTM4BQ86VI4 SMPD5-203ENST00000639008 1464 ntBASIC23.3■■□□□ 1.32
LAPTM4BQ86VI4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
LAPTM4BQ86VI4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LAPTM4BQ86VI4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LAPTM4BQ86VI4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
LAPTM4BQ86VI4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.26■■□□□ 1.31
LAPTM4BQ86VI4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
LAPTM4BQ86VI4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LAPTM4BQ86VI4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.25■■□□□ 1.31
LAPTM4BQ86VI4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.25■■□□□ 1.31
LAPTM4BQ86VI4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
LAPTM4BQ86VI4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
LAPTM4BQ86VI4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 AC025884.2-201ENST00000553429 711 ntBASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 AC007029.1-201ENST00000604183 313 ntBASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LAPTM4BQ86VI4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
LAPTM4BQ86VI4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LAPTM4BQ86VI4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
LAPTM4BQ86VI4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.22■■□□□ 1.31
LAPTM4BQ86VI4 AL359504.2-201ENST00000605506 1601 ntBASIC23.22■■□□□ 1.31
LAPTM4BQ86VI4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
LAPTM4BQ86VI4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LAPTM4BQ86VI4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LAPTM4BQ86VI4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.21■■□□□ 1.31
LAPTM4BQ86VI4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.21■■□□□ 1.31
LAPTM4BQ86VI4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LAPTM4BQ86VI4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LAPTM4BQ86VI4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
LAPTM4BQ86VI4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LAPTM4BQ86VI4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LAPTM4BQ86VI4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LAPTM4BQ86VI4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 BX255925.1-201ENST00000566954 1854 ntBASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 KRT18P60-201ENST00000312876 1297 ntBASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 AL449106.1-201ENST00000608517 1980 ntBASIC23.18■■□□□ 1.3
LAPTM4BQ86VI4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
LAPTM4BQ86VI4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAPTM4BQ86VI4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LAPTM4BQ86VI4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAPTM4BQ86VI4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LAPTM4BQ86VI4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
LAPTM4BQ86VI4 AC009831.1-201ENST00000580420 1582 ntBASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 AC133552.2-201ENST00000619106 1032 ntBASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 AC012354.3-201ENST00000623734 483 ntBASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAPTM4BQ86VI4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LAPTM4BQ86VI4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LAPTM4BQ86VI4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
LAPTM4BQ86VI4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LAPTM4BQ86VI4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LAPTM4BQ86VI4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LAPTM4BQ86VI4 AC026202.3-201ENST00000600805 1127 ntBASIC23.14■■□□□ 1.29
LAPTM4BQ86VI4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.14■■□□□ 1.29
LAPTM4BQ86VI4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LAPTM4BQ86VI4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LAPTM4BQ86VI4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms