Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 RP9P-202ENST00000450133 1212 ntBASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRRTM4Q86VH4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRRTM4Q86VH4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
LRRTM4Q86VH4 NTF6A-201ENST00000591175 560 ntBASIC24.15■■□□□ 1.46
LRRTM4Q86VH4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRRTM4Q86VH4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.14■■□□□ 1.45
LRRTM4Q86VH4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
LRRTM4Q86VH4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 AC142472.1-201ENST00000612013 1741 ntBASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 U85056.1-201ENST00000616429 682 ntBASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
LRRTM4Q86VH4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LRRTM4Q86VH4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LRRTM4Q86VH4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
LRRTM4Q86VH4 AC093536.1-201ENST00000569153 554 ntBASIC24.12■■□□□ 1.45
LRRTM4Q86VH4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
LRRTM4Q86VH4 AP004609.3-201ENST00000610705 1884 ntBASIC24.12■■□□□ 1.45
LRRTM4Q86VH4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.11■■□□□ 1.45
LRRTM4Q86VH4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRRTM4Q86VH4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
LRRTM4Q86VH4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
LRRTM4Q86VH4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRRTM4Q86VH4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.09■■□□□ 1.45
LRRTM4Q86VH4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LRRTM4Q86VH4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LRRTM4Q86VH4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LRRTM4Q86VH4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
LRRTM4Q86VH4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.08■■□□□ 1.45
LRRTM4Q86VH4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.08■■□□□ 1.45
LRRTM4Q86VH4 AC026202.3-201ENST00000600805 1127 ntBASIC24.08■■□□□ 1.45
LRRTM4Q86VH4 AC133552.2-201ENST00000619106 1032 ntBASIC24.08■■□□□ 1.45
LRRTM4Q86VH4 AC009831.1-201ENST00000580420 1582 ntBASIC24.08■■□□□ 1.44
LRRTM4Q86VH4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRTM4Q86VH4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRTM4Q86VH4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRTM4Q86VH4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
LRRTM4Q86VH4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRTM4Q86VH4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.06■■□□□ 1.44
LRRTM4Q86VH4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM4Q86VH4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.05■■□□□ 1.44
LRRTM4Q86VH4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM4Q86VH4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM4Q86VH4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM4Q86VH4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRTM4Q86VH4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 RAP2CP1-202ENST00000605179 643 ntBASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.04■■□□□ 1.44
LRRTM4Q86VH4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRTM4Q86VH4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRTM4Q86VH4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
LRRTM4Q86VH4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRTM4Q86VH4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
LRRTM4Q86VH4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRTM4Q86VH4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRTM4Q86VH4 KRT18P60-201ENST00000312876 1297 ntBASIC24.01■■□□□ 1.43
LRRTM4Q86VH4 AL592293.1-201ENST00000502889 1188 ntBASIC24.01■■□□□ 1.43
LRRTM4Q86VH4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRTM4Q86VH4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms