Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF44Q7L0R7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF44Q7L0R7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF44Q7L0R7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF44Q7L0R7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
RNF44Q7L0R7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF44Q7L0R7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF44Q7L0R7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF44Q7L0R7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RNF44Q7L0R7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
RNF44Q7L0R7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF44Q7L0R7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.51■■□□□ 1.35
RNF44Q7L0R7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF44Q7L0R7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF44Q7L0R7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF44Q7L0R7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF44Q7L0R7 AC142472.1-201ENST00000612013 1741 ntBASIC23.49■■□□□ 1.35
RNF44Q7L0R7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RNF44Q7L0R7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RNF44Q7L0R7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF44Q7L0R7 MIR3960-201ENST00000583311 91 ntBASIC23.48■■□□□ 1.35
RNF44Q7L0R7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.48■■□□□ 1.35
RNF44Q7L0R7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF44Q7L0R7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RNF44Q7L0R7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF44Q7L0R7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF44Q7L0R7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RNF44Q7L0R7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF44Q7L0R7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF44Q7L0R7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF44Q7L0R7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF44Q7L0R7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RNF44Q7L0R7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF44Q7L0R7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF44Q7L0R7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF44Q7L0R7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
RNF44Q7L0R7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF44Q7L0R7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF44Q7L0R7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RNF44Q7L0R7 RP9P-202ENST00000450133 1212 ntBASIC23.45■■□□□ 1.34
RNF44Q7L0R7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
RNF44Q7L0R7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.45■■□□□ 1.34
RNF44Q7L0R7 AP004609.3-201ENST00000610705 1884 ntBASIC23.45■■□□□ 1.34
RNF44Q7L0R7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF44Q7L0R7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
RNF44Q7L0R7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF44Q7L0R7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF44Q7L0R7 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF44Q7L0R7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF44Q7L0R7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF44Q7L0R7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF44Q7L0R7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF44Q7L0R7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF44Q7L0R7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF44Q7L0R7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 AC093536.1-201ENST00000569153 554 ntBASIC23.41■■□□□ 1.34
RNF44Q7L0R7 NTF6A-201ENST00000591175 560 ntBASIC23.41■■□□□ 1.34
RNF44Q7L0R7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF44Q7L0R7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 U85056.1-201ENST00000616429 682 ntBASIC23.4■■□□□ 1.34
RNF44Q7L0R7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF44Q7L0R7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF44Q7L0R7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF44Q7L0R7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.39■■□□□ 1.34
RNF44Q7L0R7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF44Q7L0R7 AC026202.3-201ENST00000600805 1127 ntBASIC23.39■■□□□ 1.33
RNF44Q7L0R7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
RNF44Q7L0R7 AC009831.1-201ENST00000580420 1582 ntBASIC23.39■■□□□ 1.33
RNF44Q7L0R7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.39■■□□□ 1.33
RNF44Q7L0R7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
RNF44Q7L0R7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF44Q7L0R7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF44Q7L0R7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF44Q7L0R7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RNF44Q7L0R7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF44Q7L0R7 RAP2CP1-202ENST00000605179 643 ntBASIC23.37■■□□□ 1.33
RNF44Q7L0R7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF44Q7L0R7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF44Q7L0R7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF44Q7L0R7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms