Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CNKSR3Q6P9H4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CNKSR3Q6P9H4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CNKSR3Q6P9H4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 AL031848.2-201ENST00000607670 837 ntBASIC26.91■■□□□ 1.9
CNKSR3Q6P9H4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CNKSR3Q6P9H4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CNKSR3Q6P9H4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CNKSR3Q6P9H4 AC019069.1-201ENST00000610008 1333 ntBASIC26.9■■□□□ 1.9
CNKSR3Q6P9H4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.89■■□□□ 1.9
CNKSR3Q6P9H4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CNKSR3Q6P9H4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
CNKSR3Q6P9H4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.89■■□□□ 1.9
CNKSR3Q6P9H4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CNKSR3Q6P9H4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.89■■□□□ 1.9
CNKSR3Q6P9H4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.89
CNKSR3Q6P9H4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CNKSR3Q6P9H4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CNKSR3Q6P9H4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CNKSR3Q6P9H4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CNKSR3Q6P9H4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CNKSR3Q6P9H4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CNKSR3Q6P9H4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CNKSR3Q6P9H4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CNKSR3Q6P9H4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CNKSR3Q6P9H4 AC019171.1-201ENST00000601251 1056 ntBASIC26.85■■□□□ 1.89
CNKSR3Q6P9H4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CNKSR3Q6P9H4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CNKSR3Q6P9H4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CNKSR3Q6P9H4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CNKSR3Q6P9H4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.83■■□□□ 1.89
CNKSR3Q6P9H4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CNKSR3Q6P9H4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
CNKSR3Q6P9H4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.83■■□□□ 1.89
CNKSR3Q6P9H4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CNKSR3Q6P9H4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.82■■□□□ 1.88
CNKSR3Q6P9H4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CNKSR3Q6P9H4 AL356441.2-201ENST00000443009 864 ntBASIC26.81■■□□□ 1.88
CNKSR3Q6P9H4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CNKSR3Q6P9H4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CNKSR3Q6P9H4 WHAMMP3-201ENST00000611636 1609 ntBASIC26.8■■□□□ 1.88
CNKSR3Q6P9H4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.8■■□□□ 1.88
CNKSR3Q6P9H4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.8■■□□□ 1.88
CNKSR3Q6P9H4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 AC087393.1-201ENST00000582896 145 ntBASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CNKSR3Q6P9H4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
CNKSR3Q6P9H4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CNKSR3Q6P9H4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CNKSR3Q6P9H4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CNKSR3Q6P9H4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.78■■□□□ 1.88
CNKSR3Q6P9H4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CNKSR3Q6P9H4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CNKSR3Q6P9H4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CNKSR3Q6P9H4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CNKSR3Q6P9H4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.77■■□□□ 1.88
CNKSR3Q6P9H4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.77■■□□□ 1.88
CNKSR3Q6P9H4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CNKSR3Q6P9H4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.76■■□□□ 1.87
CNKSR3Q6P9H4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CNKSR3Q6P9H4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.76■■□□□ 1.87
CNKSR3Q6P9H4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.75■■□□□ 1.87
CNKSR3Q6P9H4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.75■■□□□ 1.87
CNKSR3Q6P9H4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.75■■□□□ 1.87
CNKSR3Q6P9H4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CNKSR3Q6P9H4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CNKSR3Q6P9H4 AC239859.2-201ENST00000444165 318 ntBASIC26.74■■□□□ 1.87
CNKSR3Q6P9H4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CNKSR3Q6P9H4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.74■■□□□ 1.87
CNKSR3Q6P9H4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CNKSR3Q6P9H4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
CNKSR3Q6P9H4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.73■■□□□ 1.87
CNKSR3Q6P9H4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms