Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC008813.1-201ENST00000536597 885 ntBASIC21.12■□□□□ 0.97
ATPAF1Q5TC12 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATPAF1Q5TC12 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 AC016575.1-201ENST00000607026 382 ntBASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF1Q5TC12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF1Q5TC12 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF1Q5TC12 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF1Q5TC12 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF1Q5TC12 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF1Q5TC12 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF1Q5TC12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.09■□□□□ 0.97
ATPAF1Q5TC12 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATPAF1Q5TC12 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATPAF1Q5TC12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.08■□□□□ 0.97
ATPAF1Q5TC12 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATPAF1Q5TC12 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATPAF1Q5TC12 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
ATPAF1Q5TC12 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATPAF1Q5TC12 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 AC018358.1-201ENST00000631079 1402 ntBASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ATPAF1Q5TC12 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ATPAF1Q5TC12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATPAF1Q5TC12 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATPAF1Q5TC12 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATPAF1Q5TC12 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATPAF1Q5TC12 MIR639-201ENST00000384974 98 ntBASIC21.05■□□□□ 0.96
ATPAF1Q5TC12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATPAF1Q5TC12 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATPAF1Q5TC12 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATPAF1Q5TC12 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATPAF1Q5TC12 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 DUSP8P4-201ENST00000399538 1761 ntBASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
ATPAF1Q5TC12 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.02■□□□□ 0.96
ATPAF1Q5TC12 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.02■□□□□ 0.96
ATPAF1Q5TC12 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.02■□□□□ 0.96
ATPAF1Q5TC12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATPAF1Q5TC12 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.02■□□□□ 0.96
ATPAF1Q5TC12 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
ATPAF1Q5TC12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.02■□□□□ 0.95
ATPAF1Q5TC12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
ATPAF1Q5TC12 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 AC148477.6-201ENST00000623746 465 ntBASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.01■□□□□ 0.95
ATPAF1Q5TC12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATPAF1Q5TC12 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21■□□□□ 0.95
ATPAF1Q5TC12 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATPAF1Q5TC12 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATPAF1Q5TC12 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATPAF1Q5TC12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATPAF1Q5TC12 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATPAF1Q5TC12 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 HLA-V-202ENST00000446817 847 ntBASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATPAF1Q5TC12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 AC092803.2-201ENST00000564287 1899 ntBASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms