Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF260Q3ZCT1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF260Q3ZCT1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 DUX4L28-201ENST00000623687 678 ntBASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF260Q3ZCT1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF260Q3ZCT1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF260Q3ZCT1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF260Q3ZCT1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF260Q3ZCT1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF260Q3ZCT1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF260Q3ZCT1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF260Q3ZCT1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF260Q3ZCT1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF260Q3ZCT1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF260Q3ZCT1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
ZNF260Q3ZCT1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF260Q3ZCT1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF260Q3ZCT1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF260Q3ZCT1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF260Q3ZCT1 MIR3665-201ENST00000578708 105 ntBASIC20.77■□□□□ 0.92
ZNF260Q3ZCT1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF260Q3ZCT1 AC142381.3-201ENST00000568208 1670 ntBASIC20.77■□□□□ 0.91
ZNF260Q3ZCT1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF260Q3ZCT1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF260Q3ZCT1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF260Q3ZCT1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
ZNF260Q3ZCT1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF260Q3ZCT1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF260Q3ZCT1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF260Q3ZCT1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF260Q3ZCT1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF260Q3ZCT1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF260Q3ZCT1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF260Q3ZCT1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF260Q3ZCT1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF260Q3ZCT1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF260Q3ZCT1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF260Q3ZCT1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF260Q3ZCT1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF260Q3ZCT1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF260Q3ZCT1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF260Q3ZCT1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF260Q3ZCT1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZNF260Q3ZCT1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
ZNF260Q3ZCT1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF260Q3ZCT1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF260Q3ZCT1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF260Q3ZCT1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZNF260Q3ZCT1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF260Q3ZCT1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF260Q3ZCT1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF260Q3ZCT1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF260Q3ZCT1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF260Q3ZCT1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF260Q3ZCT1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF260Q3ZCT1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 AC022211.4-201ENST00000625094 2161 ntBASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF260Q3ZCT1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF260Q3ZCT1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF260Q3ZCT1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF260Q3ZCT1 AC138932.3-201ENST00000567634 1902 ntBASIC20.66■□□□□ 0.9
ZNF260Q3ZCT1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF260Q3ZCT1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms