Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRP1Q07954 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC14.84□□□□□ -0.03
LRP1Q07954 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRP1Q07954 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRP1Q07954 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.84□□□□□ -0.03
LRP1Q07954 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC14.84□□□□□ -0.03
LRP1Q07954 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.84□□□□□ -0.03
LRP1Q07954 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRP1Q07954 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRP1Q07954 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRP1Q07954 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.84□□□□□ -0.03
LRP1Q07954 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC14.83□□□□□ -0.03
LRP1Q07954 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.83□□□□□ -0.03
LRP1Q07954 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.83□□□□□ -0.04
LRP1Q07954 AC008406.3-201ENST00000620001 1374 ntBASIC14.83□□□□□ -0.04
LRP1Q07954 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRP1Q07954 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.82□□□□□ -0.04
LRP1Q07954 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRP1Q07954 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.82□□□□□ -0.04
LRP1Q07954 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.82□□□□□ -0.04
LRP1Q07954 MIR3960-201ENST00000583311 91 ntBASIC14.82□□□□□ -0.04
LRP1Q07954 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.82□□□□□ -0.04
LRP1Q07954 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRP1Q07954 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC14.82□□□□□ -0.04
LRP1Q07954 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRP1Q07954 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
LRP1Q07954 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRP1Q07954 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.8□□□□□ -0.04
LRP1Q07954 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRP1Q07954 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LRP1Q07954 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC14.8□□□□□ -0.04
LRP1Q07954 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRP1Q07954 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.8□□□□□ -0.04
LRP1Q07954 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.8□□□□□ -0.04
LRP1Q07954 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.8□□□□□ -0.04
LRP1Q07954 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.8□□□□□ -0.04
LRP1Q07954 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.79□□□□□ -0.04
LRP1Q07954 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.79□□□□□ -0.04
LRP1Q07954 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LRP1Q07954 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRP1Q07954 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRP1Q07954 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRP1Q07954 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRP1Q07954 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.78□□□□□ -0.04
LRP1Q07954 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRP1Q07954 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.77□□□□□ -0.04
LRP1Q07954 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.77□□□□□ -0.04
LRP1Q07954 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC14.77□□□□□ -0.05
LRP1Q07954 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRP1Q07954 ST7-AS1-201ENST00000456775 1889 ntBASIC14.77□□□□□ -0.05
LRP1Q07954 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRP1Q07954 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRP1Q07954 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRP1Q07954 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LRP1Q07954 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.76□□□□□ -0.05
LRP1Q07954 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRP1Q07954 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRP1Q07954 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.76□□□□□ -0.05
LRP1Q07954 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC14.76□□□□□ -0.05
LRP1Q07954 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LRP1Q07954 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRP1Q07954 AC087393.1-201ENST00000582896 145 ntBASIC14.76□□□□□ -0.05
LRP1Q07954 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRP1Q07954 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRP1Q07954 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.75□□□□□ -0.05
LRP1Q07954 AL139246.5-201ENST00000606645 996 ntBASIC14.75□□□□□ -0.05
LRP1Q07954 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRP1Q07954 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRP1Q07954 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.75□□□□□ -0.05
LRP1Q07954 MIR4787-201ENST00000607364 84 ntBASIC14.75□□□□□ -0.05
LRP1Q07954 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRP1Q07954 ABCB10P3-201ENST00000561950 2166 ntBASIC14.74□□□□□ -0.05
LRP1Q07954 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRP1Q07954 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRP1Q07954 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRP1Q07954 UNC93B8-201ENST00000511903 705 ntBASIC14.74□□□□□ -0.05
LRP1Q07954 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LRP1Q07954 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.73□□□□□ -0.05
LRP1Q07954 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
LRP1Q07954 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LRP1Q07954 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC14.73□□□□□ -0.05
LRP1Q07954 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRP1Q07954 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRP1Q07954 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRP1Q07954 AC131281.2-201ENST00000520478 145 ntBASIC14.72□□□□□ -0.05
LRP1Q07954 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRP1Q07954 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRP1Q07954 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.72□□□□□ -0.05
LRP1Q07954 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRP1Q07954 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.72□□□□□ -0.05
LRP1Q07954 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRP1Q07954 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRP1Q07954 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms