Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.63■□□□□ 0.89
COL10A1Q03692 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.63■□□□□ 0.89
COL10A1Q03692 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.62■□□□□ 0.89
COL10A1Q03692 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL10A1Q03692 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.62■□□□□ 0.89
COL10A1Q03692 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL10A1Q03692 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL10A1Q03692 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL10A1Q03692 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COL10A1Q03692 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL10A1Q03692 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.61■□□□□ 0.89
COL10A1Q03692 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
COL10A1Q03692 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.61■□□□□ 0.89
COL10A1Q03692 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL10A1Q03692 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL10A1Q03692 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.61■□□□□ 0.89
COL10A1Q03692 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.61■□□□□ 0.89
COL10A1Q03692 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL10A1Q03692 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL10A1Q03692 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.6■□□□□ 0.89
COL10A1Q03692 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL10A1Q03692 AC126177.7-201ENST00000547904 679 ntBASIC20.6■□□□□ 0.89
COL10A1Q03692 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.6■□□□□ 0.89
COL10A1Q03692 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL10A1Q03692 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.6■□□□□ 0.89
COL10A1Q03692 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.59■□□□□ 0.89
COL10A1Q03692 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL10A1Q03692 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.58■□□□□ 0.89
COL10A1Q03692 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL10A1Q03692 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL10A1Q03692 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL10A1Q03692 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL10A1Q03692 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL10A1Q03692 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.57■□□□□ 0.88
COL10A1Q03692 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.57■□□□□ 0.88
COL10A1Q03692 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.57■□□□□ 0.88
COL10A1Q03692 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.57■□□□□ 0.88
COL10A1Q03692 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL10A1Q03692 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL10A1Q03692 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL10A1Q03692 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL10A1Q03692 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL10A1Q03692 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
COL10A1Q03692 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL10A1Q03692 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COL10A1Q03692 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.55■□□□□ 0.88
COL10A1Q03692 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL10A1Q03692 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.55■□□□□ 0.88
COL10A1Q03692 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL10A1Q03692 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL10A1Q03692 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL10A1Q03692 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL10A1Q03692 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL10A1Q03692 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL10A1Q03692 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL10A1Q03692 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.53■□□□□ 0.88
COL10A1Q03692 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL10A1Q03692 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL10A1Q03692 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.53■□□□□ 0.88
COL10A1Q03692 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL10A1Q03692 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL10A1Q03692 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL10A1Q03692 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL10A1Q03692 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.52■□□□□ 0.88
COL10A1Q03692 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.52■□□□□ 0.88
COL10A1Q03692 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL10A1Q03692 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL10A1Q03692 AL359504.2-201ENST00000605506 1601 ntBASIC20.51■□□□□ 0.87
COL10A1Q03692 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL10A1Q03692 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
COL10A1Q03692 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
COL10A1Q03692 AC091060.1-201ENST00000623524 1766 ntBASIC20.49■□□□□ 0.87
COL10A1Q03692 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL10A1Q03692 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL10A1Q03692 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL10A1Q03692 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL10A1Q03692 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
COL10A1Q03692 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.48■□□□□ 0.87
COL10A1Q03692 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL10A1Q03692 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL10A1Q03692 MIR4449-201ENST00000578365 66 ntBASIC20.48■□□□□ 0.87
COL10A1Q03692 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL10A1Q03692 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL10A1Q03692 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.47■□□□□ 0.87
COL10A1Q03692 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.47■□□□□ 0.87
COL10A1Q03692 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.47■□□□□ 0.87
COL10A1Q03692 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL10A1Q03692 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms