Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL20P78556 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL20P78556 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL20P78556 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL20P78556 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL20P78556 AC068473.5-201ENST00000616428 2072 ntBASIC19.34■□□□□ 0.69
CCL20P78556 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL20P78556 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL20P78556 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL20P78556 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL20P78556 AC022211.4-201ENST00000625094 2161 ntBASIC19.33■□□□□ 0.69
CCL20P78556 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.33■□□□□ 0.69
CCL20P78556 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.33■□□□□ 0.68
CCL20P78556 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL20P78556 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCL20P78556 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCL20P78556 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL20P78556 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL20P78556 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL20P78556 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL20P78556 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL20P78556 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL20P78556 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL20P78556 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL20P78556 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL20P78556 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL20P78556 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL20P78556 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL20P78556 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CCL20P78556 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL20P78556 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.28■□□□□ 0.68
CCL20P78556 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL20P78556 AC079834.2-201ENST00000609776 1949 ntBASIC19.27■□□□□ 0.68
CCL20P78556 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL20P78556 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL20P78556 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL20P78556 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL20P78556 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCL20P78556 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCL20P78556 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCL20P78556 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCL20P78556 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.26■□□□□ 0.67
CCL20P78556 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCL20P78556 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCL20P78556 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCL20P78556 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL20P78556 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.25■□□□□ 0.67
CCL20P78556 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCL20P78556 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL20P78556 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL20P78556 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL20P78556 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL20P78556 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCL20P78556 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL20P78556 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCL20P78556 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCL20P78556 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL20P78556 CLDN5-201ENST00000403084 2357 ntBASIC19.24■□□□□ 0.67
CCL20P78556 LINC00543-201ENST00000567234 1845 ntBASIC19.23■□□□□ 0.67
CCL20P78556 AC010501.1-201ENST00000606270 1962 ntBASIC19.23■□□□□ 0.67
CCL20P78556 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL20P78556 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL20P78556 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL20P78556 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL20P78556 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL20P78556 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL20P78556 AC142472.1-201ENST00000612013 1741 ntBASIC19.22■□□□□ 0.67
CCL20P78556 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL20P78556 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL20P78556 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL20P78556 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL20P78556 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL20P78556 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.2■□□□□ 0.66
CCL20P78556 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL20P78556 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL20P78556 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL20P78556 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCL20P78556 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CCL20P78556 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL20P78556 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL20P78556 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL20P78556 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms